Gene Acel_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1123 
Symbol 
ID4485179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1247048 
End bp1247992 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID639729898 
Productoxppcycle protein 
Protein accessionYP_872881 
Protein GI117928330 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3429] Glucose-6-P dehydrogenase subunit 
TIGRFAM ID[TIGR00534] opcA protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0116933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG ATCTCACCGA CACCCGGGCG GCCGAGGTGC TCGCCGCGCT CGGCGAGGCG 
CGCCGACGGG CCGGTATCGC CGCGCTCGGC ATGGTCCTCA CTCTGGTCAT TGACGTCGAC
GAAGCCGGCC ACTACGACGC CGTACGCGCG GCCGTTGCCG CCTCGCGGGA ACATCCGTCC
CGGATCGTCG CGGTCATCCG GCGCACCGGC GACCGCAGCA CCCCACGGAT GGACGCCGAA
TTGCGGGTGG GTGAGGACTA CTCGCTGGCC GAAGTCGCCG TGCTCCGGCT GTACGGACCG
CTTCGCCAGC ACGCCGCGTC GGTCGTCCTG CCCCTGCTTC TTTCGGACGC TCCGGTGCTG
GTCTGGTGGC CCGGGGGCGG CCCGGTCGAC CCGGCCCATG ACGAGCTCGG TGCGTTGGCC
CAGCGACGGG TCACCGACAG CGCCGCGAAC CGGGATCCAC TCGCCACCCT CCGGGAGCGG
GCGGCGCATC ACACCCCGGG TGACACGGAT TTCGCCTGGA CCCGCGTCAC CCCGTGGCGC
ACGCTGCTTG CCGCCGCACT CGACCAACCT TTCGATCCGC TCACCGGAGG TGTCGTCGCG
GCGGCGCGTC GGAATCCCAG CGCAGAACTG CTCGCCACCT GGCTGGAGTG GCGGCTCGGT
ATCGAGGTTG AACGCCGGGT CAGCAAAGGC CCGGGCATCA CCGAGGTGCG GCTCTGCACC
CGCAGCGGTG ACATTGCGAT TACCCGGCCG GACGGCCGGC TTGCCCGTCT CAGCCGACCA
GGCCAACCGG ACCGCACCGT GCCGCTCCCC CGCCGGCCGA CCCCGGAGTT GCTTGCCGAA
GAAATGCGCC GTCTCGACCC CGACGATACC TACAGCGAGG TGCTGCGCCG GCTGAGCATG
TCGGCCGATC CGGCGACCGA GGCGGCCGAG GCCACCACCG GATGA
 
Protein sequence
MNRDLTDTRA AEVLAALGEA RRRAGIAALG MVLTLVIDVD EAGHYDAVRA AVAASREHPS 
RIVAVIRRTG DRSTPRMDAE LRVGEDYSLA EVAVLRLYGP LRQHAASVVL PLLLSDAPVL
VWWPGGGPVD PAHDELGALA QRRVTDSAAN RDPLATLRER AAHHTPGDTD FAWTRVTPWR
TLLAAALDQP FDPLTGGVVA AARRNPSAEL LATWLEWRLG IEVERRVSKG PGITEVRLCT
RSGDIAITRP DGRLARLSRP GQPDRTVPLP RRPTPELLAE EMRRLDPDDT YSEVLRRLSM
SADPATEAAE ATTG