Gene Acel_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1112 
Symbol 
ID4485775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1234584 
End bp1235597 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content71% 
IMG OID639729887 
Producthypothetical protein 
Protein accessionYP_872870 
Protein GI117928319 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.68714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.20804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCGA GGGTCGTTGC GTTGGGCGGC GGTCACGGCC TGGCCGCTTC CCTCTCCGCG 
CTGCGGCGGG TCACGGATCG GCTGACCGCG GTCGTTACCG TCGCAGATGA CGGCGGATCG
AGCGGCCGGC TGCGCCAGGA ATTCGGCGTC CTGCCCCCCG GCGACCTTCG CAAAGCTCTC
GCCGCGCTCT GCGCCGACGA CGAGTGGGGC CGAACCTGGG CCGATGTCAT TCAGCATCGG
TTCCGCGGTG ACGGGCCGCT CCGCGACCAT GCCTTGGGGA ACCTGCTGAT CGTCGGCATC
ACCGAACTGC TGGGCGACCA GATTGCCGCT CTTGACCTCA TGGGCCGGCT GCTGCAGGCC
CGCGGCAGGG TGTTGCCGAT GTCCACGATC CCGTTGGACA TCCAGGCCGA AGTCGCCGGA
CTGGATCCGG CCGATCCGAC GGCGCTGCGT ACGGTCCGCG GCCAGGTCGC CGTCGCCACC
GCACGGGGCC GGGTCGTCAG CGTGTCGCTG GTGCCGGAGG ACCCGCCAGC CTGCCCGGAA
GCCGTGGCGG CGATTCGTGA CGCCGACTGG GTGGTGCTTG GGCCGGGCTC GTGGTTCTCC
AGTGTCCTGC CGCACCTCCT CGTTCCCGAC CTGGCCGACG CCATCAATAC GACGCGGGCC
CGGCGGCTCG TCGCCCTCAA TCTGGCCCCC CAGCCCGGCG AGACGGCGGA CTTCTCTCCG
GAGAATCATC TGGAAGCGTT GATCGCGCAC GCACCTCAGT TCCACGCCGA CGTCGTACTC
GCGGATCCGA GCACGGTGGG GGATGCCGAA GCGCTCCAGA GCGTGGTCGG CGCCCTGGGT
GCCCGGTTGG TGGTGGCGCC GGTCGCCAGG GACGACGGCA CGCCTCGGCA CGATCCGGGC
CGGCTCGCCA CCGCGTATTG GCGGATATTC GCCGATCTCA CCGAAGAGCC CGACACGGCG
CGGCGCGGCG GCGAACAGTC GATCGGTGGA AGGACAGGTT CGCGATGGCA CTGA
 
Protein sequence
MPPRVVALGG GHGLAASLSA LRRVTDRLTA VVTVADDGGS SGRLRQEFGV LPPGDLRKAL 
AALCADDEWG RTWADVIQHR FRGDGPLRDH ALGNLLIVGI TELLGDQIAA LDLMGRLLQA
RGRVLPMSTI PLDIQAEVAG LDPADPTALR TVRGQVAVAT ARGRVVSVSL VPEDPPACPE
AVAAIRDADW VVLGPGSWFS SVLPHLLVPD LADAINTTRA RRLVALNLAP QPGETADFSP
ENHLEALIAH APQFHADVVL ADPSTVGDAE ALQSVVGALG ARLVVAPVAR DDGTPRHDPG
RLATAYWRIF ADLTEEPDTA RRGGEQSIGG RTGSRWH