Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1110 |
Symbol | uvrC |
ID | 4485773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1231717 |
End bp | 1233642 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639729885 |
Product | excinuclease ABC subunit C |
Protein accession | YP_872868 |
Protein GI | 117928317 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.537728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.126972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGCAC CGCAGCTGCG CAAGCCGGCT GCCGGGGAGA TTCCGGAGTC ACCCGGCGTC TACCGGTTCT GGGACGCGCA TGATCGGGTC ATCTACGTCG GAAAGGCGAA GAACCTGCGC GCCCGACTGA CCAGTTACTT CGCGGATCCG GCGCTCCTTC ATCCGCGGAC CCGGGCCATG GTGACAGCGG CCGCCCGCCT CGACTGGGTC ATCGTCCGCA CCGAGGTTGA GGCGCTGCAA CTGGAATACA ACTGGATCAA GCAGTACGAG CCTCGCTTCA ACATCAAGTA TCGGGACGAC AAGAGTTACC CTTACCTCGC CGTCACGCTC GCCGAACCCG TGCCGCGCCT CATGGTTTAT CGCGGCAAGC GAAAGAAAGG CAACCGGTAT TTCGGGCCCT TTGCGCACGC CTGGGCCATT CGTGACACTC TGGATTTGCT GCTCCGGGTG TTTCCCGCCC GCACCTGCTC CGCCGGCGTC TACCGCCGAG CTCAGCGCAT TGGACGGCCG TGCCTGCTGG GATACATCGG AAAATGCAGC GCACCGTGTG TCGGCTGGGT GTCGGAGGAG CAGCACCGGC AAATCGTCCT CGACTTCTGT GACGTGATGG GCGGAAGAGC CACGGAGTAC CTCCGCCGGC TGGAAAAGGA CATGCGCGCC GCAGCCGCCG CGGAGGACTT CGAACGGGCG GCGCGGCTGC GCGACGATGC CGCCGCGCTG CGGCTGGCCA TCGAAAAACA GACGGTGGTC CTCCCCGAGA ATACCGATGC AGACGTTATC GCCTTGGCCG ACGACGACTT GGAGGCGGCG GTCCATGTGT TCTTCGTCCG CGATGGACGG GTCCGCGGTC AGCGCGGCTG GGTGGTGGAG AAGGTCGAAG CGCTGGACAC CGCCGACCTC GTTCAGCATT TTCTCGCCCA ACTGTACGGC GAAACGGGTG CGGAATCCGC CGACGTGCCG CGGGAAATCT TGGTGCCCGT CGCACCAAGC GACACCGAGA CGCTCGAACG CTGGCTCAGC TCACGCCGCG GCGGACGCGT CACCATCCGC GTTCCCCAGC GCGGCGACAA GAAGGCCCTG CTGGAGACGG TTGCCCAGAA TGCGGCCCAG GCGCTCCACC TGCACAAGGT CCGCCGGGCC GGCGACCTCA CCGCCCGCGG CCGGGCGCTG CGGGAAATCC AGGAAGCCCT CAATCTTCCC GACGCACCGC TGCGCATTGA GTGCTACGAC GTGTCCACAT TGCAGGGCAC CGACGTCGTC GCGTCGATGG TCGTGTTTGA AGACGGCCTG CCGCGGAAGA GCGAATATCG TCGCTTTGCC CTGCGCGGCG TCGGTGGGGG GGACGTCGGG GCAATTCACG AGGTGATCAG TCGCCGTTTC CGCCGGTATC TGGACGAGCG GATGCAAACG GACTCGCCCA TCGACGACGG AACCGGGCCG GACCAGCCGC GGGTCGACGC GGCCGCGCAT CACCGAAAGT TCAGCTACCC GCCGAGCCTG GTCATTGTTG ACGGCGGTGC GCCGCAGGTG GCGGCGGCAA AGAAGGCCCT CGACGAACTG GGCATCGATG ACGTTGCCCT GGCGGGACTC GCGAAACGCC TGGAAGAAAT CTGGCTCCCC GATCGCGAGG AACCCGTCAT CCTGCCGCGG GCCAGCGAAG GACTCTACCT CTTGCAGCGG TTGCGCGACG AGGCGCACCG TTTCGCCATC TCCTACCACC GTGCGAAACG GTCCACGTCG ATGACCCGCA GTGTGCTGGA GGGAATCCCG GGAATCGGGG AGACCCGCCG CAAGGCCTTC CTGCGGCATT TCGGATCGGT TCAGCGAATG CGGCAAGCAA CCGTAGCGGA ATTGGCCGCC GTGCCGGGCG TGGGACGGCG TACCGCTGAG GTTGTTTTCG CGGCCCTGCA TGGAGCGGAC CAATGA
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Protein sequence | MHAPQLRKPA AGEIPESPGV YRFWDAHDRV IYVGKAKNLR ARLTSYFADP ALLHPRTRAM VTAAARLDWV IVRTEVEALQ LEYNWIKQYE PRFNIKYRDD KSYPYLAVTL AEPVPRLMVY RGKRKKGNRY FGPFAHAWAI RDTLDLLLRV FPARTCSAGV YRRAQRIGRP CLLGYIGKCS APCVGWVSEE QHRQIVLDFC DVMGGRATEY LRRLEKDMRA AAAAEDFERA ARLRDDAAAL RLAIEKQTVV LPENTDADVI ALADDDLEAA VHVFFVRDGR VRGQRGWVVE KVEALDTADL VQHFLAQLYG ETGAESADVP REILVPVAPS DTETLERWLS SRRGGRVTIR VPQRGDKKAL LETVAQNAAQ ALHLHKVRRA GDLTARGRAL REIQEALNLP DAPLRIECYD VSTLQGTDVV ASMVVFEDGL PRKSEYRRFA LRGVGGGDVG AIHEVISRRF RRYLDERMQT DSPIDDGTGP DQPRVDAAAH HRKFSYPPSL VIVDGGAPQV AAAKKALDEL GIDDVALAGL AKRLEEIWLP DREEPVILPR ASEGLYLLQR LRDEAHRFAI SYHRAKRSTS MTRSVLEGIP GIGETRRKAF LRHFGSVQRM RQATVAELAA VPGVGRRTAE VVFAALHGAD Q
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