Gene Acel_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1108 
Symbol 
ID4485771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1228049 
End bp1228705 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID639729883 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_872866 
Protein GI117928315 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.789331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.46822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTACA CCGGGGACGT GCGGGTCGGC GGCCCGCCGG ATGTCCGCGT GCTCCCGGGA 
TTGCAGATCA CCAAGCTGGC GGTCGGGCCG TACGACAACA ACGCCTACCT GCTCCGGTGC
CGGGCGACCT GCGACACCGT GCTCATTGAT GCTGCGGCCG AGCCGGGACG GTTGCTGGAC
GCGATCGGCG ACGGACGGCT GGTCGCCGTG GTCACGACCC ACCGTCACCA CGACCACTGG
CAGGCGCTCC GGGCCGTCGT CGACGCGACC GGGGCAGAGG TTATCGCGCA TCCCCTGGAC
GCCGATGCGC TCCCGCTCCC GGTGGGGTGG CCGGTCAGCG ACGGTGACCG GATCACGGTG
GGAAACAGCG AGATCGGCGT CATCCATCTC CGTGGTCATA CTCCGGGAAG TATTGCGCTG
GTGTACGACG CCGATCCGGA TCAGCCGCAT ATTTTTACCG GCGACTCACT CTTCCCGGGC
GGTCCCGGCA ATACGCGAGG CAACAAGCAG GATTTCACGA CCCTGATGAA TGACCTGGAA
GAGAAGGTCT TCGGCCGATT TCCGGACGCG GCCTGGATTT ACCCGGGGCA CGGCCGTGAC
ACCACGCTGG GAGCCGAACG ACCCCACCTC GGTGAATGGC GGGCTCGTGG CTGGTGA
 
Protein sequence
MTYTGDVRVG GPPDVRVLPG LQITKLAVGP YDNNAYLLRC RATCDTVLID AAAEPGRLLD 
AIGDGRLVAV VTTHRHHDHW QALRAVVDAT GAEVIAHPLD ADALPLPVGW PVSDGDRITV
GNSEIGVIHL RGHTPGSIAL VYDADPDQPH IFTGDSLFPG GPGNTRGNKQ DFTTLMNDLE
EKVFGRFPDA AWIYPGHGRD TTLGAERPHL GEWRARGW