Gene Acel_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1093 
Symbol 
ID4484999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1210683 
End bp1212008 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content62% 
IMG OID639729868 
Product4-aminobutyrate aminotransferase 
Protein accessionYP_872851 
Protein GI117928300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID[TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCTG ACCAGACCAC GGAGTCGGCC GTTCCAGGGC CGCGCAGTGC CGAGCTGCAT 
CGCCGGCGGG AGGCTGCGGT CGCCCGGGGC GTGAGTTCCG TTGCACCCTT CTATGTCGCC
GGCGCACGCG ACAGCCGGCT CGTCGATGTG GACGGGAGAT CGTATATTGA CCTCACGTCC
GGGATTGCGG TCGCCAATGT CGGCCATGCG CCAAAGCACG TTATCGAGGC GATTCACGCT
CAGGCTGAGA GTTTTCTGCA CACCTGTTTC ATGGTCGCGC CATACGAGCA GTATGTGGCG
GTGTGCGAAC GACTGAATGC CCTAACGCCC GGTGCATTTG CGAAGAAAAG TCTCCTGGTC
AATTCAGGGG CTGAAGCGGT GGAGAACGCT GTCAAGATTG CCCGCTATGC CACAAATCGG
CCGGCCGTCG TTGTCTTTGA GAATGCCTAT CACGGGCGCA CCAACTTGAC GATGGCGATG
ACCGCGAAAG CGCATCCGTA CAAAGACGGA TTCGGCCCCT TCGCGGGTGA AATCTATCGA
GCGCCGATGT CGTATCCTTT TCGCGATCCG GCAGCCATGA CCGGCGAGGA GGCCGCTGCG
CGCGCCATCG ACGTTATCGA GCGCTACGTC GGAGCGGCAC GTGTTGCATG CGTCGTCATA
GAACCGATCC AGGGTGAAGG AGGATTTGTC GTTCCCGCAC CCGGATTCCT ACCCACATTG
CGGCAGTGGT GCAGTGAAAA CGATGTCCTC TTCGTCGCTG ACGAGATTCA AACCGGGTTC
GGACGGACCG GGCACATGTT CGCGTGCGAG CACGAGTCCG TCGTCCCCGA CATTATGATT
CTCGGTAAGG CTCTGGCGGG AGGTCTGCCG CTTGCCGCGG TGACTGGCCG CGCGGATCTC
GTTGATCGGG TGCATCCGGG CGGGTTGGGC GGTACGTACG GTGGAAATCC GGTCGCGTGT
GCGGCGGCGC TCGCCACCCT GCACCTTCTC GAGGCAATGA ATGCGCCCGC CCGCGCCCGC
GGAATTGAGA AGATCATGCG GCCGCGGCTG GATGCTCTCG CAGCTCGCTA TCCGTTCATT
GGCGACGTTC GCGGTCGGGG TGCCATGCTT GCCCTCGAGG TGGTGCGGCC GGGCACAAAG
GATCCCGATG CGGCGCGGAC AGCCGATATC GTGCGTTCAT CGTATGACGA AGGTCTCGCA
GTCCTAAGCT GCGGTATGTA CAGCAATGTA CTGCGGTTTC TGCCGCCGCT GAGTATCGAC
GACGCGCTGC TCGTGGAAGC GATGAACCGG CTCGACCACG TCTTCGAGCG GGTAGCCGCC
GCTTGA
 
Protein sequence
MTSDQTTESA VPGPRSAELH RRREAAVARG VSSVAPFYVA GARDSRLVDV DGRSYIDLTS 
GIAVANVGHA PKHVIEAIHA QAESFLHTCF MVAPYEQYVA VCERLNALTP GAFAKKSLLV
NSGAEAVENA VKIARYATNR PAVVVFENAY HGRTNLTMAM TAKAHPYKDG FGPFAGEIYR
APMSYPFRDP AAMTGEEAAA RAIDVIERYV GAARVACVVI EPIQGEGGFV VPAPGFLPTL
RQWCSENDVL FVADEIQTGF GRTGHMFACE HESVVPDIMI LGKALAGGLP LAAVTGRADL
VDRVHPGGLG GTYGGNPVAC AAALATLHLL EAMNAPARAR GIEKIMRPRL DALAARYPFI
GDVRGRGAML ALEVVRPGTK DPDAARTADI VRSSYDEGLA VLSCGMYSNV LRFLPPLSID
DALLVEAMNR LDHVFERVAA A