Gene Acel_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1086 
Symbol 
ID4484992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1201148 
End bp1201861 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID639729861 
ProductABC transporter related 
Protein accessionYP_872844 
Protein GI117928293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0710157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC TGGAATTGCG CGACGTGCAC GTACGGTATG GCGCCATCGC CGCTCTGCGC 
GGGGTCGACG TGACAGTTGA GAGCGGGGAG ATCGTCACCC TGCTGGGTGC CAACGGTGCC
GGTAAGACGA CGACGCTGCG CACGATTTCC GGGCTCCTTC ACCCACACAC CGGCCAGATT
TTCTTCGACG GACGACGGAT CGACACCCTG CCCCCGCACG ACATCGTGGG ACTCGGGATC
AGCCATGTGC CCGAGGGACG GCGGGTCTTT CCGCGGATGA CCGTCACCGA GAATCTCGCG
ATGGGCGCCT ACCGCCTGGG CCGTCCCAGA AAGTCGGACT TCGACCGCGT TTTCGCCCTC
TTCCCGCGCC TCGCCGAGCG GCGTCATCAG GATGCGGGGA CGCTGAGCGG GGGAGAGCAG
CAGATGCTTG CCATCGGCCG CGGCCTGATG TCCCACCCCC AGTTGCTCTT GCTGGACGAG
CCGTCGATGG GACTGGCTCC GCTCCTCGTC GAACAGATCT TCGACATCAT CAAGGAGATC
AACGAGCAGG GTACGACGAT TCTCGTCGTG GAACAGAACG CCGCCCAGGC GCTTGCCCTG
GCGGATCGCG GCTACGTCCT GGAGACCGGC ACGATCGTGC TCTCCGGACC GGCACCGGAG
CTGCGGATCG ATCCGCGCGT GAAGGCCGCC TACCTCGGCG AGGGTGTCGC CTGA
 
Protein sequence
MSLLELRDVH VRYGAIAALR GVDVTVESGE IVTLLGANGA GKTTTLRTIS GLLHPHTGQI 
FFDGRRIDTL PPHDIVGLGI SHVPEGRRVF PRMTVTENLA MGAYRLGRPR KSDFDRVFAL
FPRLAERRHQ DAGTLSGGEQ QMLAIGRGLM SHPQLLLLDE PSMGLAPLLV EQIFDIIKEI
NEQGTTILVV EQNAAQALAL ADRGYVLETG TIVLSGPAPE LRIDPRVKAA YLGEGVA