| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1085 |
|---|
| Symbol | |
|---|
| ID | 4484991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1200318 |
|---|
| End bp | 1201151 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639729860 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_872843 |
|---|
| Protein GI | 117928292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0894019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCG GCACCGGTGA CGACCCGATC CTCGAGGTGG ATCGGGTGAC CCTGCGGTTC
GGCGGGGTGA CGAGCCTCGC CGAGGTGTCC ATTCGCCAAC AGCGAGGCGA GTTGCTTGCC
GTCATTGGTC CGAACGGCGC GGGAAAGACG TCCTTGTTCA ACGCCATCAC CGGTGTCTAT
CGGCCGCAGG ACGGTGACAT CCGATTCCGG GCGCGGGACC AGCGGCCGGT CTCGCTCATC
GGGAAGAAGG TGCATGAGGT CACCAAGCTG GGTATTGCCC GCACGTTTCA GAACATTCGG
CTGTTCGCGG CCCTGACCGT CTTCGAGAAC GTCAAGATTG GTATTGAATC GCGGCAGCGG
ACCGGCCCAG TCAGCGCGAT GCTCCGGTTG CCGCGGACAC TGCGGGAAGA ACGCGACGGC
GACCGGCTTG CCACTGAACT CCTTGACTTT GTGGGATTGC GGAACCGCGC GAACGACCTT
GCGGCGTCAC TGCCGTACGG TGCCCAGCGC CGGTTGGAAA TCGCCCGGGC GCTCGGCACC
CGCCCGCAGC TGCTGTTGCT CGACGAACCT GCCGCCGGCA CAAATCCCGT TGAGAAGGCC
GAATTGGAAG ACCTCATCCG GCACATCAAT ACCGAGATGG GCCTGTCCAT TCTGCTCATC
GAGCACGACA TGCGGCTGGT GATGTCCCTC GCCGAGCGGG TCGTCGTCCT GAATTTCGGC
CGCGTCATCG CGGAAGGCCC ACCGGCTCAG GTGCAGGCCG ATCCGGCGGT CATTGAAGCC
TATTTGGGCA CCCGCGCGTA CCGAGCCGCG ACCGGAGAGG AGGCGTCGGG GTGA
|
|---|
| Protein sequence | MASGTGDDPI LEVDRVTLRF GGVTSLAEVS IRQQRGELLA VIGPNGAGKT SLFNAITGVY
RPQDGDIRFR ARDQRPVSLI GKKVHEVTKL GIARTFQNIR LFAALTVFEN VKIGIESRQR
TGPVSAMLRL PRTLREERDG DRLATELLDF VGLRNRANDL AASLPYGAQR RLEIARALGT
RPQLLLLDEP AAGTNPVEKA ELEDLIRHIN TEMGLSILLI EHDMRLVMSL AERVVVLNFG
RVIAEGPPAQ VQADPAVIEA YLGTRAYRAA TGEEASG
|
|---|
| |