Gene Acel_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1083 
Symbol 
ID4484989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1198076 
End bp1199014 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID639729858 
Productinner-membrane translocator 
Protein accessionYP_872841 
Protein GI117928290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.913177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCGTCA CCCGGCATTT CTGGGATTTC TTCGTCAGCG GGCTGGCGAA CGGATTCGTC 
TACGCGCTGA TCGCCTTGGG ATACACGCTG GTGTACGGCG TACTGCAGCT CATCAACTTC
GCGCACAGCG AAGTCTTCAT GTCGGGTGGG TTTGGCGGCC TCTTTGCGAT TAATTTCGCG
ATCGGCAGCC GGCATCCGCA CGGTCTGTCG TCGGTGTGGT TTGTTCTTGT CGGGCTCGCC
GCCGGTGCGG TGACCGGCGG TGTCGTCGCC TACATCCTCG AGCGGGTCGC GTATCGCCCG
CTGCGGCGGC GCAACGCGCC CAAATTGGCG TTCCTCATCA GCGCGATCGG AATGTCGTAC
TTCTTGTACA ACCTGGCCGG GAAAGAATTC GGCCGCGACG CGCGCACGAT GAAGCCGCCG
TTCACTGTCT CGCCGAACAA GCCGCTCTTC ACCGTTTTCG GCGCCCCGGT GAATCTGTAC
GACGCGGTCA TCGCCGTATC GGCCATCGCC ATGCTGATCC TCCTCGACCG CGTCGTCCAG
CAGACCCGAC TGGGGCAGGG CATCCGGGCG GTCGCCCAGG ACGCCGACAC CGCCGCCCTG
ATGGGCGTGA ACATCGACCG CGTCATTGCG CAGACCTTCG TCCTCGGCGG ATTGCTCGGC
GGCGCCGCGG GTTTCCTCTT CGGGCTTGGC ACGGCGGGGG TGAGTTACAC GATGGGCTTC
ACCCCGGGCA TCAAGGCGTT CACCGCTGCC GTGCTCGGGG GCATCGGAAA TATCCGGGGG
GCGATGCTCG GCGGTCTGCT GCTCGGCGTC GTCGAGAATC TCTCCTCGGC CTGCTTCGGC
GCGAGCTGGG TGGACGTCGT CGCGTTTTAC ATTCTGGTTC TGGTCCTGCT CGTACGGCCG
ATGGGCCTGC TCGGCGAGCG GTTGGGGAGG TCGGCGTGA
 
Protein sequence
MCVTRHFWDF FVSGLANGFV YALIALGYTL VYGVLQLINF AHSEVFMSGG FGGLFAINFA 
IGSRHPHGLS SVWFVLVGLA AGAVTGGVVA YILERVAYRP LRRRNAPKLA FLISAIGMSY
FLYNLAGKEF GRDARTMKPP FTVSPNKPLF TVFGAPVNLY DAVIAVSAIA MLILLDRVVQ
QTRLGQGIRA VAQDADTAAL MGVNIDRVIA QTFVLGGLLG GAAGFLFGLG TAGVSYTMGF
TPGIKAFTAA VLGGIGNIRG AMLGGLLLGV VENLSSACFG ASWVDVVAFY ILVLVLLVRP
MGLLGERLGR SA