Gene Acel_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1077 
Symbol 
ID4485325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1187301 
End bp1188038 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID639729851 
Producthypothetical protein 
Protein accessionYP_872835 
Protein GI117928284 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.040986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.838313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCTG AGCGGACGAA CGAGATGGCC GCTGACACGC CCCGGGCGGA GATCCATCAC 
GATCACCGGG ACGTGACCGG CGGGTGGTTG CGCCCGGCCG TGTTCGGCGC CATGGATGGA
ATGATCTCCA ATGTCTCGTT GATCGCTGGC TTTGTTGGGG CAAGTGCGAC ACCGCACCTG
GTGATTTTGA GCGGACTTGG CGGGCTGGTC GCCGGCGCGT TCTCGATGGG CGTGGGGGAG
TACGTCTCGG TTGCCTCACA GGCGGATCTT GCGCGGGCTG AGATCGAGGT TGAGCGAACC
GAGTTGCTGA CCAACGCGCA CGCGGAACGT GAAGAGTTGG CCCAGCTGTA CATCGCGCGG
GGCGTGGAAC CCGAACTGGC CCGGGAAGTG GCCCGGCAGC TGTCGCGTGA CCCCGAACGG
GCGTTGGAAA TCCACGCCCG CGAAGAGCTG GGGCTTACGC CGCACGACTT GCCGTCGCCA
ATCCTGGCCG CCCTGTCGTC CTTCCTGGCG TTCTCGGTCG GCGCTCTTCT TCCGCTGCTG
CCCTTCCTGC TCGGCGCGAC GGTGTTCTGG CCGGCGGTGC TGGTCACGGG GGTAGCGCTC
TTTGCCGCCG GTTCAGCGGT GGTGCGGATC ACCGCCCGGC CGTGGTGGTA CGGCGGGTTG
CGGCAGTTGC TCTTTGGTGC CGCTGCCGCC GGCGTGACGT ACGGCGTGGG TGCGGCGATC
GGCACCCATG TGGCCTAG
 
Protein sequence
MTAERTNEMA ADTPRAEIHH DHRDVTGGWL RPAVFGAMDG MISNVSLIAG FVGASATPHL 
VILSGLGGLV AGAFSMGVGE YVSVASQADL ARAEIEVERT ELLTNAHAER EELAQLYIAR
GVEPELAREV ARQLSRDPER ALEIHAREEL GLTPHDLPSP ILAALSSFLA FSVGALLPLL
PFLLGATVFW PAVLVTGVAL FAAGSAVVRI TARPWWYGGL RQLLFGAAAA GVTYGVGAAI
GTHVA