Gene Acel_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1074 
Symbol 
ID4485322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1184212 
End bp1185489 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content70% 
IMG OID639729848 
Producttryptophan synthase subunit beta 
Protein accessionYP_872832 
Protein GI117928281 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.32093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.660313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG TCCGACCAGC GTTGCCGGAT GCCGCCGGGC ATTTCGGCCC GTTCGGCGGG 
CGCTTCGTAC CGGAGGCGCT CGTCGCGGCA CTGGACGAGC TCGCCGCTGC ACACGCGGTG
GCGATGGCCG ATCCGGATTT CCAGCGCGAA CTACGGCAGC TGCTCACGTC CTACGCCGGC
CGGCCGACAC CGATCACCGA GGCGCGGCGG TTCTCCGAGC ACGCCGGCGG AGCCCGCATT
CTGCTGAAAC GCGAGGACCT GACGCACACC GGCTCCCACA AGATCAATAA CGTGCTGGGG
CAGGCACTGC TCACTGTCCG GATGGGCAAG AAGCGGGTCA TCGCCGAGAC CGGGGCAGGC
CAGCATGGCG TGGCGACCGC TACGGCTGCG GCGCTCTTCG GCTTGGACTG CACGATCTAC
ATGGGCGAGG AGGACACGCG CCGGCAGGCC CTGAACGTGG CCCGGATGCG GTTGCTCGGC
GCGGACGTCG TCCCGGTCGA CGCCGGTACC CGCACGTTGA AAGATGCGAT AAACGAGGCA
TTCCGCGACT GGGTGACGAC CGTCGAATAC ACCCACTACG TCTTCGGCAC GGTGGCCGGC
CCGCATCCTT TTCCCGCGGT GGTCCGCGAT TTTCAGCGGA TCATCGGCGA CGAGACGCGG
ACCCAGGTGC TCGACGCTCT CGGACGGTTG CCGGACGCGG TGGTCGCCTG TGTCGGCGGC
GGGTCCAATG CCATTGGGAT TTTCACCGCC TTCCTTGCGG ATCCGCAGGT CCGGCTGTAC
GGATTTGAAG CCGGCGGGGA GGGGATCGAG ACGGGTCGGC ATGCGGCGAC GTTGAGCGCC
GGGAGCCGGG GCGTCCTGCA CGGCGCCCGC ACCTACGTGC TGCAGGACGC CGACGGCCAG
ACCCGCCCGT CGCATTCCAT TTCCGCGGGG TTGGACTACC CGGGCGTCGG GCCGGAACAC
GCGTGGCTGC GGGAAACCGG ACGGGTCTGC TACCAGCCGG TCACCGACGC CGAAGCGATG
GACGCGTTCC GGCTTCTGGC CCGCACGGAG GGCATTCTCG CGGCGTTGGA GAGCGCGCAC
GCCCTGGCCG GCGCGTTACG GGTCGGGCGG GAGCTTGGCC CCGGGAGTGT CGTGGTCGTC
AGCTTGTCGG GGCGCGGCGA CAAAGACGTG CAGACCGCGG CCCGGTGGTT CGGCCTTGAT
GCGTCGGACA GGTCCAGCAG GTCGGCCGCG TACCGCCGGC CGGGCTCCGG CGTGGACGTC
CCCGGCAGGC CGATGTGA
 
Protein sequence
MSGVRPALPD AAGHFGPFGG RFVPEALVAA LDELAAAHAV AMADPDFQRE LRQLLTSYAG 
RPTPITEARR FSEHAGGARI LLKREDLTHT GSHKINNVLG QALLTVRMGK KRVIAETGAG
QHGVATATAA ALFGLDCTIY MGEEDTRRQA LNVARMRLLG ADVVPVDAGT RTLKDAINEA
FRDWVTTVEY THYVFGTVAG PHPFPAVVRD FQRIIGDETR TQVLDALGRL PDAVVACVGG
GSNAIGIFTA FLADPQVRLY GFEAGGEGIE TGRHAATLSA GSRGVLHGAR TYVLQDADGQ
TRPSHSISAG LDYPGVGPEH AWLRETGRVC YQPVTDAEAM DAFRLLARTE GILAALESAH
ALAGALRVGR ELGPGSVVVV SLSGRGDKDV QTAARWFGLD ASDRSSRSAA YRRPGSGVDV
PGRPM