| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1054 |
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| Symbol | dnaE |
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| ID | 4484836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 1161659 |
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| End bp | 1165231 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639729829 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_872813 |
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| Protein GI | 117928262 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.785794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.120623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTA GGCTCACTCC GGTTAGATGG CCGAGGGAGG TACGGAGCGT GGGCGGGTCA
GGCGATCGGA GTTTCGTTCA CCTGCACGTG CACACCGAGT ACTCGATGCT CGACGGCGCA
GCGCGGATCA AGGACCTCCT CGCGGAGACC GTCGCGATGG GCGCCCCGGC GATCGCCATG
ACCGATCACG GCAACGTGTA CGGCGCGTAC GACTTCTACA AGCAAGCCCG GGCGTGCGGC
ATCAATCCGA TCATCGGCAT GGAGGGGTAT CTCGCACCCG GCAGCCGCTT CGACCGGCGG
CGCGTCAGTC TGGCAACCGC TGGTCCCGGC GACGAAAACG CCGGCGAGAT GTACACCCAC
ATCACATTGC TCGCCGAGAA CACCGACGGC ATGCACAATC TCTTCCGGCT CTCCAGTCTC
GCCAGCCTTG AGGGCTTCTA TTACAAGCCG CGCATGGATC GCGAATTGCT GGCCACGTAC
GCAAAAGGAA TCATTGCCAC GACGGGCTGC CCGAGCAGCG AGGTCAACCG CCTTCTTCAG
CAGGGAAAGT ACGCCGCGGC CCGCCAGGCG GCGGCCGAGT ACCGGGACAT CTTCGGCGCG
GAGAATTTCT ACTGCGAACT CATGGATCAC GGGCTGGAGA TCGAGCGCCG CGTTCGTGAC
GACCTGCTGC GCCTTGCGCG GGAACTCCGT CTCCCGCTGC TGGCGACCAA CGACCTGCAC
TACACCTACG CCCAGGATTG GGAGGCGCAC GAAGTTCTGC TCTGCGTGCA AACCGGAAAG
ACGCTGGCCG ACCCGAACCG GTTCAAGTTC GACGCCAAAG AATTCTATTT GAAGACTCCG
GCGCAGATGC GTGAGCTCTT CCGGGATCTG CCGGAAGCCT GTGACAACAC CCTCGCGATA
GCCGAGCGGG TGCACGTGGA ATTTGCCGAA GGCGCCAACC TCATGCCGCG CTTTCCGGTG
CCGCCCGGGG AAACCGAAGA ATCCTGGCTC GTCAAGGAGG TGGAGGCCGG GCTGCACCGG
CGCTTCCCCT CCGGCGTGCC GGACGCGTAC CGCGAGCGGG CGGAGTACGA GCTGACGGTC
ATCTGCCAGA TGGGATTCCC GGGCTACTTT CTCGTCGTGG CCGACCTCGT CCGCTACGCA
AAGGAGAACG GCATCCGCGT CGGGCCGGGC CGGGGGAGCG CCGCCGGGTC GATGGTGGCC
TACGCTCTCG GCATCACTGA GCTCGACCCC ATCAAGCACA AGCTGCTTTT CGAGCGCTTT
CTCAACCCCG AGCGGGTCTC GATGCCCGAC ATCGACATCG ACTTCGACGA ACGCCGCCGC
GGCGACATGA TTCGCTATGC CACCCAGAAG TACCGCGAGG ACCACGTCGC CCAGATCATC
ACCTACGGCA CCATCAAGGC CAAGCAAGCC ATCAAGGATT CCGCCCGCGT TCTCGGCTAT
CCCTATGCGA TTTCCGATCG GATCACCAAG CTCATGCCAC CGGCGTTAAT GGGCCGTGAC
CTGTCGCTTG CGGCCATCTT CGATCCGTCT CACCCGCGTT ACGCGGAGGC GGCGGAATTC
CGCGCCGTCT ACGAGAACGA TCCCGACGTC CGGAAGATTG TCGATACCGC CCGCAACCTC
GAAGGTCTCA AGCGCCAGTG GGGCGTGCAC GCCGCCGGCG TCATCCTCTC CCGGGAACCG
CTCCTCGATG TCATTCCCAT TCAGCGCCGT GAGCAGGACG GAGCCATCAT CACGCAGTTC
GACATGGGTG CCTGCGAAGC GCTCGGCCTG CTCAAGATGG ATTTCCTCGG CCTGCGCAAC
CTTACCGTGC TTGACGACTG CCTTGCCGGC ATCAAAGCCA ACCGCGGTAT CGACCTGGTG
CTTGAAGAGG TCCCGCTCGA CGACCCGGCG ACCTACGAGC TTCTCCAGCG TGGCGAAACG
CTTGGCGTTT TCCAATTGGA CGGCGGTCCG ATGCGCGCCC TGTTGCGCTC GATGCGGCCG
GATAATTTCG AGGATATTTC CGCCGTCTTG GCCCTCTACC GTCCCGGGCC GATGGGCGCT
AATGCGCACA TCGAATATGC GGACCGCAAG AACGGACGCA AACCCGTCGA GCCCATTCAC
CCCGAACTCG CCGAGCCGCT CGCCGACATT CTCGATGACA CCTACGGCGT CATCGTTTAC
CAGGAGCAGG TCATTGCCAT CGCCCAGCGT GTCGCGGGCT ACTCCTTGGG ACAGGCCGAC
TTGCTGCGCC GCGCCATGGG GAAGAAGAAG AAGGAAATCC TTGACAAGGA ATACATCCCG
TTCTCGGAGG GAATGCGGAA GAACGGCTAC AGCGAGGATG CCATCCGGAC CCTATGGGAG
ATTCTCGTTC CCTTCTCCGA CTACGCCTTC AACAAGGCGC ACACCGCCGG CTACGGTCTG
GTCAGCTACT GGACGGCGTA CCTCAAGGCC AATTACCCTG CCGAATACAT GGCCGCGCTG
CTGACCAGCG TGAAAGACGA CAAGGAAAAA TCGGCCCTCT ACCTGCACGA GTGCCGGCGC
ATGGGCATTC GGGTGCTCCC GCCGGACGTC AACGAATCGG ACACCAACTT CACCCCGCGC
GGTGACGACA TTCGGTTCGG CCTCTCCGCG GTGCGCAACG TGGGGGAGAA CGTCGTAGCC
TCCATCATCG AGACGCGGCG CTCCAAGGGC CGATTCACCG ACTTCTTTGA CTTCCTGGCC
AAAGTTGAAC CGGTTGTCTG CAACAAGAAG GTGGTCGAGT CGCTCATCAA GGCCGGAGCG
TTCGACTCCC TTGGTCATAC GCGGCGGGGA CTGCTGGCCG TGCACGCCGA GGTGGTCGAT
TCGGTCATGG AGACCAAGCG TGCGCACGCC GTCGGTCAGT TCGACCTCTT CGGCTCGGCA
GCGGACGCGC CCGAGGCGGT GTCGATCGTG CGCCGGCCGA TTTCCGACGA GGAATGGGAG
AAGCCGGTGC TTCTCGCCGC CGAGCGGGAG ATGCTCGGAC TCTACGTGAG CGACCATCCA
CTCCTTGGCG TCGAGCACGT CCTGGCCCGG CTGGTCGATT GTTCGATTGC CGCACTCACC
GACGACGAGC GGCCCGACGG CGCGCAGATC ACGATCGGCG GCATCGTCGT CTCGCTGACC
CGGCGCGTCA CTAGGCAGGG CAGTCCATGG GCGGTTGTCA CGCTCGAGGA TCTGGACGGA
TCGATTGAGG TCCTCGTCTT CCCGCAGACC TACGAGCGGT TTGCGACCGT GCTGACCCAG
GACGCCATCA TTTGCGTGCG CGGCCGGCTC AACCGGCGTG ACGACGTCCC CACCGTCGTC
GCATCCGACA TCGTCGTACC GGATCTCTCC GGCGCCCAGC GCGCGCCCCT CGTCCTCCAG
CTGCCCGCCA GCCGATGTGT CCCTCCGGTG GTGGAGAAAC TTCGCGAAGT TCTCTCCACC
CATCCGGGTA CGACCGAGGT CCAGTTGGCG CTGCGCAACG GCAACCGGAC GACGATCCTG
CGCCTGGATG ACCGGCTGCG GGTCGACCCC ACTCCCGCCC TGATGGGGGA CCTCAAGGAA
CTGCTCGGCC CGGCGTGTTT CAGCGCGTCG TAA
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| Protein sequence | MPVRLTPVRW PREVRSVGGS GDRSFVHLHV HTEYSMLDGA ARIKDLLAET VAMGAPAIAM
TDHGNVYGAY DFYKQARACG INPIIGMEGY LAPGSRFDRR RVSLATAGPG DENAGEMYTH
ITLLAENTDG MHNLFRLSSL ASLEGFYYKP RMDRELLATY AKGIIATTGC PSSEVNRLLQ
QGKYAAARQA AAEYRDIFGA ENFYCELMDH GLEIERRVRD DLLRLARELR LPLLATNDLH
YTYAQDWEAH EVLLCVQTGK TLADPNRFKF DAKEFYLKTP AQMRELFRDL PEACDNTLAI
AERVHVEFAE GANLMPRFPV PPGETEESWL VKEVEAGLHR RFPSGVPDAY RERAEYELTV
ICQMGFPGYF LVVADLVRYA KENGIRVGPG RGSAAGSMVA YALGITELDP IKHKLLFERF
LNPERVSMPD IDIDFDERRR GDMIRYATQK YREDHVAQII TYGTIKAKQA IKDSARVLGY
PYAISDRITK LMPPALMGRD LSLAAIFDPS HPRYAEAAEF RAVYENDPDV RKIVDTARNL
EGLKRQWGVH AAGVILSREP LLDVIPIQRR EQDGAIITQF DMGACEALGL LKMDFLGLRN
LTVLDDCLAG IKANRGIDLV LEEVPLDDPA TYELLQRGET LGVFQLDGGP MRALLRSMRP
DNFEDISAVL ALYRPGPMGA NAHIEYADRK NGRKPVEPIH PELAEPLADI LDDTYGVIVY
QEQVIAIAQR VAGYSLGQAD LLRRAMGKKK KEILDKEYIP FSEGMRKNGY SEDAIRTLWE
ILVPFSDYAF NKAHTAGYGL VSYWTAYLKA NYPAEYMAAL LTSVKDDKEK SALYLHECRR
MGIRVLPPDV NESDTNFTPR GDDIRFGLSA VRNVGENVVA SIIETRRSKG RFTDFFDFLA
KVEPVVCNKK VVESLIKAGA FDSLGHTRRG LLAVHAEVVD SVMETKRAHA VGQFDLFGSA
ADAPEAVSIV RRPISDEEWE KPVLLAAERE MLGLYVSDHP LLGVEHVLAR LVDCSIAALT
DDERPDGAQI TIGGIVVSLT RRVTRQGSPW AVVTLEDLDG SIEVLVFPQT YERFATVLTQ
DAIICVRGRL NRRDDVPTVV ASDIVVPDLS GAQRAPLVLQ LPASRCVPPV VEKLREVLST
HPGTTEVQLA LRNGNRTTIL RLDDRLRVDP TPALMGDLKE LLGPACFSAS
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