| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1049 |
|---|
| Symbol | |
|---|
| ID | 4484831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1155376 |
|---|
| End bp | 1156398 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639729824 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_872808 |
|---|
| Protein GI | 117928257 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.186781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0406542 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGC ACTCGTCCGT GGCGGATTCC GTCAAGAGCC AGGACCGCGC GACTCCGGCG
GTCCTGGCGG TCATCAGCGC GCTCCTGAGG CAACCGGCGC GGCTATGGCG CTCCGCCGCC
ATTCTCATGC CCTTTCTGGC CCTGTTCATC GCCCTGGCCG TGGCGAGTCC ACCCTTCCTG
TCAAAGACCA ATCTGCTCAA CATTCTCGAT CAACAGGCGG CGACACTCAT CATCGCCGCA
GCCGGCACTC TCGTCCTCAT CAGCGGCGGC CTCGACCTCT CCGTCGGTGC GACGTATGCG
CTCGCCGGGG TCGCGTCGGC GATGGTCGCG CAGCACCATC CGGCTCTCCT CGGCGCGCTG
ATCGCCGTTG CGATCGGAAT AGGCATCGGC GTCGTCAACG GAATCGTGAG CACGCTCTTC
CGCATCAACT CGCTCATCGC CACACTGGCG ATGTCCTTCA TCGTGAGCGG CCTGGCAGCT
CGCATTTCCA ACGGAAATCT CATCGTCCTC ACCAGCAATC GTGAATACGC ACGTATCGCG
CAGACCGAAT TCCTCACCAT TCGCACCTCG ATTTGGACAA TGCTGGTGGT CGTGCTGGCA
CTCGGGTTTC TCCTTGCCCG CACGACGTTC GGCCGATATC TATACGCCGT CGGCGGCAAC
ATCGAGGCTG CCCGGCTCGC CGGCGTACGG ATCAACGCCA TCCGAGTTGT CGCCTTCACC
CTCAGCGGCT TTGCCGCCGC CCTGGGCGGC GTCATCGACA CATCGCGCGT GCTCAGCGCC
CAAGCCAACA ACGGCAGCAC ACTCGCCTTC ACCGTGCTCG CAGGAATCGT CGTCGGGGGA
ACGTCAATCC TCGGCGGCGA AGGAGCGATC TGGCGCACGG TCGTCGGGGT ACTCTTCATC
GCCCTGATCG GAAACGGTTT CGATCTGCTC GGGCTGAACC CGCTCTACCA GCAGATGACC
CTCGGCGCCA TTCTTCTGCT TGCCGTCGGT ATCGACGCGT GGTATCGGTT ACGCCAGCCG
TAA
|
|---|
| Protein sequence | MMEHSSVADS VKSQDRATPA VLAVISALLR QPARLWRSAA ILMPFLALFI ALAVASPPFL
SKTNLLNILD QQAATLIIAA AGTLVLISGG LDLSVGATYA LAGVASAMVA QHHPALLGAL
IAVAIGIGIG VVNGIVSTLF RINSLIATLA MSFIVSGLAA RISNGNLIVL TSNREYARIA
QTEFLTIRTS IWTMLVVVLA LGFLLARTTF GRYLYAVGGN IEAARLAGVR INAIRVVAFT
LSGFAAALGG VIDTSRVLSA QANNGSTLAF TVLAGIVVGG TSILGGEGAI WRTVVGVLFI
ALIGNGFDLL GLNPLYQQMT LGAILLLAVG IDAWYRLRQP
|
|---|
| |