Gene Acel_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1044 
Symbol 
ID4484521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1151145 
End bp1151783 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID639729819 
ProductXRE family transcriptional regulator 
Protein accessionYP_872803 
Protein GI117928252 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0507985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.081223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCG CCCAGGTACC ACAGGTTGGT GAGCGGTTGC GCCGGGCCCG CTTGCGTCGC 
GGCGTCAGCC TGCGCAGTCT GGCCCGGGAC TTGGGCGTCT CCGCGAGCCT GCTGTCCCAG
ATCGAGACAG GGAAGAGCCA GCCGTCGGTG AGCACCCTGT ATGCGATAAC GACCGCCCTC
GGCCTGGCGA TGGAGGAGGT TTTCGAGCAA CCGACCCGTG CGCGGCGCTC CGTGGCGCCG
CCGATGGAGA TGGACCTCTC TCCGCCGGCG CGCGCCGCCC GCGAGGAGCG GCATGAGCGG
CTCGGACCCG TGGTGACGCC TGAGGACCGG AAGGTGCTCC ACCTGGATTC CGGTGTGACG
TGGGAATGGC TTGGCCGGCT CCCACACAGC CACGTCGAGT TCCTCCTCAT CACCTACCAC
CCTGGAGGAA CCTCCTCGAG CAACGGCGGG CTGATGCGGC ATCACGGCGC TGAGTATGGA
TATCTGATCA GCGGGGAACT CATTCTCACG CTCGGTTTCG AGGAATACCG CTTGCGTCCC
GGTGACGCTG TTTCCTTTGC GTCGACCACT CCCCATCGGC TTCGGAACGA AGGCCAGCAG
CCGGCCGTCG GCGTCTGGTT CGTCACTGAG GAGGTGTAG
 
Protein sequence
MNVAQVPQVG ERLRRARLRR GVSLRSLARD LGVSASLLSQ IETGKSQPSV STLYAITTAL 
GLAMEEVFEQ PTRARRSVAP PMEMDLSPPA RAAREERHER LGPVVTPEDR KVLHLDSGVT
WEWLGRLPHS HVEFLLITYH PGGTSSSNGG LMRHHGAEYG YLISGELILT LGFEEYRLRP
GDAVSFASTT PHRLRNEGQQ PAVGVWFVTE EV