| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1032 |
|---|
| Symbol | |
|---|
| ID | 4484573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1139481 |
|---|
| End bp | 1140425 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639729807 |
|---|
| Product | ribosomal large subunit pseudouridine synthase D |
|---|
| Protein accession | YP_872791 |
|---|
| Protein GI | 117928240 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.55205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0222288 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG AATCGTTTGA TGACCGTCTG CTGCCGGTCC CGGAGGGGTT GGACGGCGAG
CGGGTGGACG TCGCCATCGC GCGGCTGCTC GGCTTGTCGC GGACTCGAGT CGCCGATTTG
ATCGCCGCGG GTCAGGTTCG GGTCGACGGC GTCGTCCCGG CGAAGTCCGC TCGGCTTGCC
GCAGGGTCGT GGCTCGAGGT CCGCGTGCCC CGTCCCGGAC CGCCGCGCCC GCCGGTGATC
CCGACACCGG TGGCGGACAT GGCGGTCGTG TACGACGATC CGGACATCGT CGTCGTGGAC
AAACCCGCCG GGGTCGCGGC GCACCCCAGT CCCGGCTGGG AGGGTGCGAC GGTCCTCGGA
GCGCTCCTTG CCGCCGGGTA TCGGGTCGCT ACTTCCGGGG CGGCCGAGCG GCAAGGCATC
GTCCACCGGT TGGACGTCGG CACCAGCGGG CTCATGGTGG TCGCCAAGAG CGAGCGGGCG
TATTCGACAC TCAAACGCGC ATTCCGGGAA CGCGAGGTGC ACAAGATTTA CCACGCGCTC
GTGCAGGGAC ACCCGGATCC GGTGCGCGGC ACCATCGACG CCCCGATCGA CCGGCATCCG
GTGCACGAGT TCCGGTTCGC GGTCGTCGCC GGCGGAAAGC CGAGCGTCAC GCATTACACG
ACCCTTGAGG CCCTGCCGGC CGCGAGCCTG CTGGAGATCG AACTCGAGAC CGGGCGGACC
CATCAGATCC GGGTGCACAT GGCGGCGATC CGGCATCCGT GCGTCGGTGA CCTCATGTAC
GGCGCTGACC CCACGTTCGC GGCCCGGCTG GGCCTGGACC GCCAGTGGTT GCATGCGGTC
CGCTTGCGCT TCACGCACCC GATCCTCGGC AGCCCGATCG AACTCACCTC GTCGTACCCA
CCGGATTTGG ATCGGGCACT GCGGATCGTG CGTCAGGCAG CGTGA
|
|---|
| Protein sequence | MTDESFDDRL LPVPEGLDGE RVDVAIARLL GLSRTRVADL IAAGQVRVDG VVPAKSARLA
AGSWLEVRVP RPGPPRPPVI PTPVADMAVV YDDPDIVVVD KPAGVAAHPS PGWEGATVLG
ALLAAGYRVA TSGAAERQGI VHRLDVGTSG LMVVAKSERA YSTLKRAFRE REVHKIYHAL
VQGHPDPVRG TIDAPIDRHP VHEFRFAVVA GGKPSVTHYT TLEALPAASL LEIELETGRT
HQIRVHMAAI RHPCVGDLMY GADPTFAARL GLDRQWLHAV RLRFTHPILG SPIELTSSYP
PDLDRALRIV RQAA
|
|---|
| |