Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1006 |
Symbol | |
ID | 4485010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1110961 |
End bp | 1112382 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639729781 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_872765 |
Protein GI | 117928214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000549268 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0206005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCGC TGCCGCTTCG ACTGGTCGCC CAGCTCGCCG GCGGCGGTCT CGCCGACGTC CCGGACCCTG AGCGGCCGGT GACCGGCCCG GTTGTCGCGG ACTCCCGGCA GGTGACGCCC GGCGGGTTGT TTGTCGCGAT TCGGGGCGCA CGGGTCGACG GGCACGCGTT CGCGGAACAG GCGGTGTCAG CCGGGGCGGT TGCCGTCCTG GCCGACCATC CGGTCGGCGT ACCGGCGATC ATCGTGGATG ACACGGTCCG CGGTCTTGGT CGGCTGGCCC ACGGCTATCT CGACCTCCTG CCGGACCCGG TGGTCATTGG GATCACTGGG TCCAGTGGAA AGACCTCGAC GAAGGATCTC GGTGCGCAGG TGCTGGCCCG GCTTGGCCCG ACCGTTGCAC CCACCGGGTC GCTCAATACC GAGGTCGGGC TGCCGCTCAC AGTCCTCCGG GCCGATCGGG ACACCCGGTT TCTCGTGTTA GAGAAGAGCG CCCGCGGGGT CGGGCACATC GCGTATCTCT GCCGCATCGC CCCGCCGCGC ATCGGGGTGG TGTTGAACGT CGGCTCGGCG CACCTCGGCG AGTTCGGCAG CCGGGAAGCC ATTGCCCAGG CGAAGGGGGA GCTGGTCGAG GCGTTGCCCG CGGACGGCAC GGCCGTGCTC AACGCGGACG ATCCGCTGGT GCTGGGGATG CGACACCGGA CGCGGGCACG TGTCGTCACG TTCGGGACCT CCGCAGACGC CGACGTGCGG GCAACGGAGA TCATGACCGA TGCGACGGCC CGGCCGAGCT TCCGGCTGTG CTTCCCGGAC GGTGCCGGGT TGCCGGTCGC GCTGCAGATG CACGGCGTCC ACCACGTCTC CAACGCACTC GCGGTAGCGA CGGTCGCCTG GGTGCTCGGA CTCGGTGCTG AGGAGATCGC TGCCGCGCTC CGGGAGGCCA GGCCGCTCAG CCGATGGCGG ATGGAGGTCA CCACCCGGGA CGACGGTGTC ACGGTGATCA ACGACGCGTA CAACGCCAAC CCCGAATCGA TGACCGCGGC GCTGACCGCG CTCGCCGCCG CGACCGCAGC CCGCCGGATC GCCGTCCTCG GGCCGATGGC CGAACTCGGG CCCGCCGCGC CGGCGGCGCA CGCGGAGGTC GGCGAGACGG CGGCCCGGGT TGGCGTGGAC TGGCTGATCG TTGTCGGCGC GGACGCCACA CCGATCGCCG ACGGGGCACG CCGTGGCGGG CTTGCCGCGG AGGCGGTGAC CGTTGTACCG GACGCCGCCG CGGCAACAGC CCTGTTGACG CCGGCGCTGC GCGCCGGGGA CGTGGTCGTG ATCAAGGCGT CGCGATCGTA CGGGTTGGAG CAGGTCGCCG CCGCGCTGCT CGCCCAGACA CCAGCCGTCG CGTCGCCGGT CGCTGAGGGG ATCGGCCGGT GA
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Protein sequence | MIPLPLRLVA QLAGGGLADV PDPERPVTGP VVADSRQVTP GGLFVAIRGA RVDGHAFAEQ AVSAGAVAVL ADHPVGVPAI IVDDTVRGLG RLAHGYLDLL PDPVVIGITG SSGKTSTKDL GAQVLARLGP TVAPTGSLNT EVGLPLTVLR ADRDTRFLVL EKSARGVGHI AYLCRIAPPR IGVVLNVGSA HLGEFGSREA IAQAKGELVE ALPADGTAVL NADDPLVLGM RHRTRARVVT FGTSADADVR ATEIMTDATA RPSFRLCFPD GAGLPVALQM HGVHHVSNAL AVATVAWVLG LGAEEIAAAL REARPLSRWR MEVTTRDDGV TVINDAYNAN PESMTAALTA LAAATAARRI AVLGPMAELG PAAPAAHAEV GETAARVGVD WLIVVGADAT PIADGARRGG LAAEAVTVVP DAAAATALLT PALRAGDVVV IKASRSYGLE QVAAALLAQT PAVASPVAEG IGR
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