Gene Acel_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0934 
Symbol 
ID4484884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1029757 
End bp1030656 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID639729709 
Producthypothetical protein 
Protein accessionYP_872693 
Protein GI117928142 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.209626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCC TTGTCTCCGG CGCCTCCGGG CTCATCGGCT CGGCACTGGT CCGGTCGTTG 
CGCGCCGACG GCGTCAGCGT GCAGCGTCTG GTACGCCGGG CTGTTCAGCA GGCTGACGAG
GTCGGTTGGG ACCCGCAGGC CGGCCGCGGT CCGGACCCGA AAGTCGTGGA CGGCGTCGAC
GCCGTTGTGC ACCTGTCAGG CGCGGGGCTC GGCGACCGAT TCTGGACGAC GTCCTACAAA
CGCGAAATCC GCGCGAGCCG CGTCGAGACC ACCCGGATAT TGGCGGAGAC GTTAGCCGGG
CTGGCTGCAC CGCCGCGGGT TTTCCTTGTC GCGTCGGCCA TCGGCTGGTA TGGCGACACC
GGGGACCGGG AGACTGACGA GAACGGCCCG CCGGGCTCGG ATTTTCTTGC CAACGTCTGC
CGCGAATGGG AGGAGGCCGC GGCCCCCGCG CGGCTCGCCG GTATCCGGAC GGTGCACGTC
CGCAGCGGGA TCGTGCTCTC CACCCGTGGC GGGGCACTGG CGCGTGTTCT CCCGCTCTTC
CGGCTCGGGC TCGGCGCCCG GCTCGGGACC GGCCGGCAGT GGGTGAGCTG GATCGCCCGG
CCCGACCACG TCGCCGCGCT GCGTTTTCTT CTGGATTCCG ACCTGTCGGG GCCGGTGAAT
CTGACCGCAC CCCAGCCGGT GACGAACGCC GAGTACACCG CGGCGATTGC CCGGGCGGTG
CGCCGTCCTG CTCTTCTTTC GGTTCCCGCG CCGGCGTTGC GCCTCCTGCT CGGCGAGATG
GCCCAGCTTC TGCTCGTGAG TCAGCGGGTC ATTCCCCGCC GGCTGCTCGA TGCCGGGTTC
ACATTTGGTT ACCCGGACGT CGAATCCGCG GTCCGCGAGT TGGTCGCCTC CGGTTCCTGA
 
Protein sequence
MRVLVSGASG LIGSALVRSL RADGVSVQRL VRRAVQQADE VGWDPQAGRG PDPKVVDGVD 
AVVHLSGAGL GDRFWTTSYK REIRASRVET TRILAETLAG LAAPPRVFLV ASAIGWYGDT
GDRETDENGP PGSDFLANVC REWEEAAAPA RLAGIRTVHV RSGIVLSTRG GALARVLPLF
RLGLGARLGT GRQWVSWIAR PDHVAALRFL LDSDLSGPVN LTAPQPVTNA EYTAAIARAV
RRPALLSVPA PALRLLLGEM AQLLLVSQRV IPRRLLDAGF TFGYPDVESA VRELVASGS