| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0932 |
|---|
| Symbol | |
|---|
| ID | 4485926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 1027736 |
|---|
| End bp | 1028797 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639729707 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_872691 |
|---|
| Protein GI | 117928140 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.75045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAGT TCTCCGATGA CGGCGCTCGA TCCTGGCTGT CGCTTCTTCG GCAGCGCGGT
GATTACGGCG CGTCGCCGAT CCGCGGCGGC GGTGACCGTG CCGCGGCCGC GCTCTGGGGA
GCCTTGCTCT TCGGCGTCGG CGGGCTCGCG GCGCTCTCGG TCACGGTGGT TCCGTACTGG
CCGGAGGCTC ATCCGCGGGT GTACCAGGCG CTCGGCCTCG GACTCCTCGC GGTGGCCGGC
GTTCTCGTCG GCATCCGCCA CCACACGGGC CGGGTACTCC GCCACGGGCT GCTCGGCGTC
GGCGTCGGCG CCGTCACCGT CGCGGTCTGG GCGGCGGGTC CCGCCCCGCA GTCCGTGCTT
CCCGCGCTGT TTTACGCCTT TCCTGCGGTC TACGCGTGCC TTTATCTGCC GAGACGCGTC
GCGTTCGGCT ACTTGGTCGC CATCGCCGCC GCCTACCTCG GCGCGCTGGC GCTGCACTGG
CGTGCGCCGA TGGGCGCGCA GTGGGCCATC ACCGTAGCCG CGTTCGGCGT ACCTCTGCTC
ATCATCGTCA CGTTGATTGA CCGGCTCTCG GTGCAAGCCT GGTACGACGC TCTGACCGGC
TTGCCGAACC GCCGGCTCGC CGACTTCCTG CTGGCCGCCG AGATGGCGGC AGCGGGACGG
CACGGCCGGC CACTCACGAT TGCCGTCTGC GATCTCGATG AGCTCAAGCG GATCAACGAC
ACGCGCGGGC ATCGGGCGGG GGACCAATTG CTGGCCCGGG CCGGGCGGAC GTGGGCGGCC
ACGCTGCGCG CCGGTGACCT TCTCGCCCGG ACCGGTGGGG ACGAATTCCT CCTCGTGCTC
CCCTCAACCA CGGCGGACCA GGCCGCACAG GTGATCGAGC GGATGCGGGC GGCCGCTCCC
GACATCACGT TCACCGCAGG CATCGCTACC TGGGACGGCC GGGAGCCCGA CTATCGGCTG
GTGCATCGGG CGGACGCCGC GCTGTACGCC GCGAAAGCCG AACGGCGCGG CACCACCGGC
ATCGCGTCAG CCGGCGGAGT GAGCACCGTC ATCCGGTTGT AG
|
|---|
| Protein sequence | MKQFSDDGAR SWLSLLRQRG DYGASPIRGG GDRAAAALWG ALLFGVGGLA ALSVTVVPYW
PEAHPRVYQA LGLGLLAVAG VLVGIRHHTG RVLRHGLLGV GVGAVTVAVW AAGPAPQSVL
PALFYAFPAV YACLYLPRRV AFGYLVAIAA AYLGALALHW RAPMGAQWAI TVAAFGVPLL
IIVTLIDRLS VQAWYDALTG LPNRRLADFL LAAEMAAAGR HGRPLTIAVC DLDELKRIND
TRGHRAGDQL LARAGRTWAA TLRAGDLLAR TGGDEFLLVL PSTTADQAAQ VIERMRAAAP
DITFTAGIAT WDGREPDYRL VHRADAALYA AKAERRGTTG IASAGGVSTV IRL
|
|---|
| |