Gene Acel_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0908 
Symbol 
ID4485814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1002254 
End bp1003270 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID639729683 
Productinner-membrane translocator 
Protein accessionYP_872667 
Protein GI117928116 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.579851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAG CGGGCCTGCT GCGCGGTGGA ATCTTCGCCG TCCTTGTTCT TGCCATGCCG 
TTGATGACCA GCGCGCATTG GATTCTCAAC ATCGCCGTCT TCACGGTGAT GTATGCCGGG
CTTGCCCTCG CATGGAACCT CATTGGCGGT TTCGCGGGCT ACCCGTCGCT TGGCCATGCC
GCATTCTTCG GCATCGGTGC TTACGTCGAG GCGATTTGGT TCAACCACCA CAGCGTCGGC
GCCGGCTACC TCCCCTTCTT CGTGCTGCCC ATCGTGGGTC TTGCCGTCGC GTTCGCGATG
CTTCCGGTTG CCTGGGTCGC GCTGCGGACT CGCGCAGACG TCTTCGCCAT CGTTACGATC
ACTCTGCTCT TCGTGGTGCA GACGTTGGCT TTCAACCTGC ACAGTGTCAC CGAGGGGTCC
CAGGGGATCG GCATTCATCC GCCGCCGTTC GACCCTGCAA CCTATGAGCG GCCCTTCTAC
TGGGCAATGG CGGCGATTTT TCTGCTCGCT ATGATCGTCA CCTGGCTTGT GCAGAACAGC
AAGACCGGAT TGGCCTTGCT CGCGATCCGA GGGGACGAAG ACCGGGCCAG CGGCATCGGC
GTCCATGTGA CCTTGGCCAA GCTGGTCGCT TTCTTCCTCT CGACCGCACT CACCGCGATG
ATCGGTGCGG TTTGGGCGTA CTACGTCACG TTCATTTATC CGCAGTTCGC TGTCGATCCT
CTCGTGACGA TCGGCATGGT TCTCATGACG TTCCTCGGCG GCCGTGCCAC CTTGTGGGGA
CCCGTGGTCG GGGCGCTCAT CCTCGCACCA GCACAGCAGT ACCTGGCGTA CCAGTTCGGT
TCCAGTCGGC TGTACCTGCT CGCGTACGCC GCAGTCTTCC TCATCGTCAT GGTGTTCCTG
CCCCGGGGAA TTGTGCCGAC CCTGGCGGAG TGGCGCTTTT CGCGGAGGCG GGCGGCTCGA
GCCGCCACCG CAGGCATTCG ACCTCAGTCT CGCAGACAGC AGGTGACGAC GCCATGA
 
Protein sequence
MRPAGLLRGG IFAVLVLAMP LMTSAHWILN IAVFTVMYAG LALAWNLIGG FAGYPSLGHA 
AFFGIGAYVE AIWFNHHSVG AGYLPFFVLP IVGLAVAFAM LPVAWVALRT RADVFAIVTI
TLLFVVQTLA FNLHSVTEGS QGIGIHPPPF DPATYERPFY WAMAAIFLLA MIVTWLVQNS
KTGLALLAIR GDEDRASGIG VHVTLAKLVA FFLSTALTAM IGAVWAYYVT FIYPQFAVDP
LVTIGMVLMT FLGGRATLWG PVVGALILAP AQQYLAYQFG SSRLYLLAYA AVFLIVMVFL
PRGIVPTLAE WRFSRRRAAR AATAGIRPQS RRQQVTTP