Gene Acel_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0888 
Symbol 
ID4485720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp979083 
End bp979937 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID639729663 
ProductABC transporter related 
Protein accessionYP_872647 
Protein GI117928096 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.3127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTT CACCGACGAT TCGCGTTGAG GGCTTGACGA AAGCCTTCGG CACGAGGGTT 
GTCTTCCGCG ACCTCTCCTT TACGGTGGGG GGCGACGAAA TTGTCTCCAT CGTCGGACCG
TCCGGTTGCG GAAAGACCAC CCTGCTGCGT TGCGTTGTCG GCTTGATGGC TCCAACCGAT
GGCGCGGTGT ACATTCACGA TCGGAGGGTG ACCGAACCGC CGCCCGGAGT GGCGATGGTG
TTCCAGAATT TTGGTCTCTT TCCATGGAAG ACCGTCACGG CGAACATCGC CTATGGGCTG
GTTGTTCAGG GCGTGCCGGC ACGGGTCTGG CGGCCGAAAG TTGAGCACCT CATCAAGCTT
GTCGGTTTAG CGGGTTTCGA GAAGGCGTAT CCGTACCAAC TCTCCGGCGG CATGCAGCAA
CGTGCCGGTC TCGCGCGTGC ACTGGCCATC GACCCCACGG TCCTGGCGAT GGATGAGCCG
TTCGCCTCCC TTGATGCACA GACCCGTGAC CTCCTGCAGC TTGAGGTGCT GCGGATCTGG
GATGCACACC CGGTGGCGAC ACTCTTCGTC ACGCACTCGA TCGACGAAGC TGTGCTGATG
GGGGATCGTG TCGTGATTTT GCGTGGCCGG CCGAGTCAAA TCTTCGACAT TGTGACTGTT
GGACTACCAA GGCCCAGGAC GCGGGAGGCC GTCGACACGG AGCGGTTCCG GATCGTACGC
GATTACGTCT GGAACGCGGT GATGCAAACG GATTCACCGG CATCTCCCCT CAACGATGCT
GCAGCGTCCG TTCACCAAGG CGTCGCTTCT TCGGCACGTA TCGTCGGGCA CGAGACAGGA
CAGGAAAGAA GATGA
 
Protein sequence
MTASPTIRVE GLTKAFGTRV VFRDLSFTVG GDEIVSIVGP SGCGKTTLLR CVVGLMAPTD 
GAVYIHDRRV TEPPPGVAMV FQNFGLFPWK TVTANIAYGL VVQGVPARVW RPKVEHLIKL
VGLAGFEKAY PYQLSGGMQQ RAGLARALAI DPTVLAMDEP FASLDAQTRD LLQLEVLRIW
DAHPVATLFV THSIDEAVLM GDRVVILRGR PSQIFDIVTV GLPRPRTREA VDTERFRIVR
DYVWNAVMQT DSPASPLNDA AASVHQGVAS SARIVGHETG QERR