Gene Acel_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0886 
Symbol 
ID4485718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp977477 
End bp978244 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID639729661 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_872645 
Protein GI117928094 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.543426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCGG ACTGGCGGCG GCGCACCCGA GCCCTTGCCG GATACGCCGG CGGCGTCCTG 
CTGGGCGTTG CCGCGTGGCA GATCGTCGGG AGTCACAGCC AACCGCAGAT CTTCGTTACC
CTCACCGCGA CCCTGCGGCA CCTCGGCAGC ATGATCGACG ATGGTACCTT GCCGCAGGCG
CTGGTGAATT CGTTCTCGGT TTACGGCGCA GGGGTGGGAA TTGCGATTCT TCTGGGTGCC
CTCGGCGGTC TGCTTCTCGC ACGAATTCGC GTGTTGCGGG TCGCCTTCGA GCCGTACATC
ATGGGGCTCT ACGCCACGCC GCTCATTGCG TTGATCCCGT TCATCCTCGC TCTGCTGGGG
TACCGGTTCT GGCCGAAGGT CGTCGTCGTC TTTCTCTTTT GCGTTTTCCC GGTATTGCTG
GCTACCCAGC GAGGCGCCCA GAGCGTAGCG GTTGAGTTGA TGGAGGTTGC CAAACTTTAT
CGATCGAGTG AACGGGCGAT TTGGTTGCAC GTCGTCATTC CGTACACCCT GCCGTTCTTC
ATGACGGGTG TTCGCCAGGC GCTGGCCCGG GGACTTGTTG GCATGATCGC TGCCGATATC
TTCCTCAGTG CGAACGGGCT CGGCGGCTTG CTCGTCTCGG CGGCCCAACA GTTCAGCACC
GCCGAGATGC TCGCCGTTGT TCTCGTGATT ACCGTCGCAG GCTTGATGCT GATGGCGGTC
GGCCGGCTCG TGGAGAAGTA CTTCGCTCGG TGGCGGGTGA CCGGATGA
 
Protein sequence
MQPDWRRRTR ALAGYAGGVL LGVAAWQIVG SHSQPQIFVT LTATLRHLGS MIDDGTLPQA 
LVNSFSVYGA GVGIAILLGA LGGLLLARIR VLRVAFEPYI MGLYATPLIA LIPFILALLG
YRFWPKVVVV FLFCVFPVLL ATQRGAQSVA VELMEVAKLY RSSERAIWLH VVIPYTLPFF
MTGVRQALAR GLVGMIAADI FLSANGLGGL LVSAAQQFST AEMLAVVLVI TVAGLMLMAV
GRLVEKYFAR WRVTG