| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0872 |
|---|
| Symbol | |
|---|
| ID | 4485650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 963855 |
|---|
| End bp | 964526 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639729646 |
|---|
| Product | L-ribulose-5-phosphate 4-epimerase |
|---|
| Protein accession | YP_872631 |
|---|
| Protein GI | 117928080 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAATCG CTTCGTCGGA CGTCATCGCG CAACTGCGAC GCGAGTTGCT CATCCTGCAC
CGCAAACTGG TGACCTGGGG TCTGGTGGTC TGGACGGCGG GCAACGTCTC CGCGCGGATC
CCCGGCGAAC CGCTCATGCT CATCAAACCG AGCGGGGTGG ACTACGATCT GCTGCGCGAA
GAATCCTTCG TCGTCTGCGA CTTCTCCGGT GGCCGGGTCG AGGGTTCGCT CACCCCCTCC
AGCGACGCCC GCAGTCACGG CTACATTTAC GCGCACATGC CACACGTCGG CGGCGTCGTC
CATACCCATT CGCCCTACGC AACGGCCTGG GCGGCGCGAG GCGAACCGAT ACCATGCATC
CTTACCGCGA TGGCCGATGA ATTCGGCGGC CCCATTCCAG TCGGACCGTT TGCACCGATC
GGCGACGAGC GGATCGGCCG CGGCGTGGTG GAGACGCTCC GCACGTCACG ATCTCCGGCT
GTTCTGATGA AGAACCACGG TGTTTTCGCC GTCGGTGCGA CGGCGGAGGC TGCGGTCAAG
GCGGCCGTGA TGTGCGAAGA CGCCGCCCGC ACCGTCTACT TGGCGCGCAA CCTCGGCGAG
GTCGAACCAT TGCCGGCGCA CGACATTGAC GCCCTGCACC GCCGCTATCA GACGGCGTAC
GGCCAACGGT GA
|
|---|
| Protein sequence | MTIASSDVIA QLRRELLILH RKLVTWGLVV WTAGNVSARI PGEPLMLIKP SGVDYDLLRE
ESFVVCDFSG GRVEGSLTPS SDARSHGYIY AHMPHVGGVV HTHSPYATAW AARGEPIPCI
LTAMADEFGG PIPVGPFAPI GDERIGRGVV ETLRTSRSPA VLMKNHGVFA VGATAEAAVK
AAVMCEDAAR TVYLARNLGE VEPLPAHDID ALHRRYQTAY GQR
|
|---|
| |