| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0859 |
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| Symbol | |
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| ID | 4485742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 949232 |
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| End bp | 950011 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639729633 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_872618 |
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| Protein GI | 117928067 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.213878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATCT CCGTCTCGAC GCCGCTTCTG GTCGCGTTCC TCCTCGCGAC CATCCGGACG
TCGGCGTGGC TCGTCGTCGT CCCAATCTTC GGAACGCGCA TCATCCCCGG CATGGTCAAG
GCCGCCTTCG CAATGGCCCT CGCGTTTCCT GTCTCTGGTG CGCTGGCCCC CCTCGCACCC
GCTCCGCAAG TGCTCCCGCT GTGCACGGCG ATTCTGCAGA ACGTTGCAGC CGGACTCGCG
ATGGGCGTTG TCACGCTCAC CCTCTTCGCT GCGGTACGCG CCGCCGGCGG TCTGCTGGAC
TATTTCGGCG GCTTCTCCCT CACGTATGCG TTCGACCCGA TGGCGGTGCA GAACGATTCC
GTTCTCGCCC GGATGTACGA CCTGCTTGCG GTCACTCTGC TCTTCGCCGG CGGCGGTTAT
CTGCTGCTGC TCAAGGGGCT GCTCTCTTCG TACACCGTCA TCCCCCTCGC GAGCAGTCAT
CCGGCGCGGA TCCTCGCCGA ACTGGCAACG GTGAACATCG GGAGTTTCGC CGTCTCATGT
TTGGAAATCG CCGGCCCGCT GCTGGCGGTG CTCGTGGTCG CCGACATCGG CCTCGGTCTC
CTGACGAAGA TTGCACCGGC GCTCAATGTG TTCTCCCTCG GTTTTCCGCT GAAAATCCTG
GTCACCCTCA CCCTCGTCGG CGGCACGTTC GTCGCGTTGC CGCACGCGGT CGACGCGTTG
GTCGAACGGA TCCTGCACGA CGGCGGCGGC GTCGCCTCTC TCTTCTCCTG GCGGCATTAG
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| Protein sequence | MSISVSTPLL VAFLLATIRT SAWLVVVPIF GTRIIPGMVK AAFAMALAFP VSGALAPLAP
APQVLPLCTA ILQNVAAGLA MGVVTLTLFA AVRAAGGLLD YFGGFSLTYA FDPMAVQNDS
VLARMYDLLA VTLLFAGGGY LLLLKGLLSS YTVIPLASSH PARILAELAT VNIGSFAVSC
LEIAGPLLAV LVVADIGLGL LTKIAPALNV FSLGFPLKIL VTLTLVGGTF VALPHAVDAL
VERILHDGGG VASLFSWRH
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