Gene Acel_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0813 
Symbol 
ID4486301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp900182 
End bp901585 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content61% 
IMG OID639729586 
Productputative transcriptional regulator 
Protein accessionYP_872572 
Protein GI117928021 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.12457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGGA ATGAACTCGA ACAAATCGCC CAACAGGGTG AATCCGAAAC CATCGAGTTC 
AAGAAATCCA CAGCACAGAT CCGGCGGGCG ATGGAAACAC TCTGCGGCAT GCTCAACGGC
CATGGCGGCC GTGTGCTGTT CGGTATTACA CCCCAGGGGC AGATCGTTGG GCAGACGGTT
TCTGACAAAA CTTTACGGGA GGTAGTCGAT CAGCCGAGGC GTTTCGAACC TCCGGGCACC
GTTGCCCAAA CACGCATTGA CCTCGGTGAT GACAAGGAGT TGCTGGTGCT GGAAGCACAG
CCGGATCCTA CCCGGCGCCC CTATATCTTT GACGGTCGGC CTTATCAGCG GGTGGGTTCC
ACCACCTCCG TGATGCCCCA GGAAACCTAC CACCGGCTTC TGGCAGAACG TCCCGACAGT
CGCACCCGCT GGGAAACGCT TCGAGCCGAG GGATATGGTG TGGCCGACCT CGACCAAGAG
GAAATCCTGC GCACAGTGCG CCTTGGTGTT GCCGCCGGCC GCTTGCCGGA ATCAACGGGC
GGCGACATTC CCGATATCCT GCATCGGTTG GAATTGCTCA AGGGCGGTCG TCTGAACAAC
GCAGCCATCG TTCTATTCGG CACCTGCTTC CTCCCTGACT ATCCTCAATG CCAGCTGCGT
ATGGCCCGCT TCCGTGGGGT GGACAAATCG GAGTTCCTCG ACCAGCGCCA GATCGAAGGG
CACGCCTTTG CCCTGCTTGA CGAGGCCATG CTGTTTTTGC GCCGCCATCT TCCCGTGGCG
GGCCGGGTCG TCCCCGGGCT GTTCGAGCGT GAGGACGAGC CATTGTTTCC GCTGGAGGTC
CTGCGTGAGG CGCTGGTCAA TGCCTTCTGC CACCGGGACT ACACCATCGC AGGCGGGGCG
GTCAGCCTGG CCATCTACGA CGATCGCCTG GAGATTTGGA GCGACGGGAC CTTGCCATCC
GGTCTCACCC CGGAGGATCT CAAGCGAGAC CACACGTCAA AACCGAGCAA TCCGTTGATC
GCCAAGGTGT TCTACCTTCG CGGCGTCATC GAGCGCTGGG GACGCGGGAC ACAAAAGATC
GTCGAGCTGT GTGTCAAGGC TGGGCACCCA GAGCCAGAAT TCGGCGAGCA GGCCGGTAGC
GTCTGGGTGC GCTTCGTACC GAGCGGTTAC ATTGCCCCGC ATCGCGTAGC GCATGACCTT
ACCGAGCGAC AGCGGGAGGT CCTGCAAATC ACTGCTCATC ATGGCCCGAT CCCTCTTCGA
GAGATCATGC AGCAGATGGC AAGCCCGCCG GCCTCCGCTA CGGTCCGGGA TGATCTCTAC
CACCTGAAGC GTCTGGAATT GGTCGATTCC GCTGGACATG GCCGAGGGGC CGTGTGGCGG
CTGCGCAGAG AGGAAAGCTC ATGA
 
Protein sequence
MNRNELEQIA QQGESETIEF KKSTAQIRRA METLCGMLNG HGGRVLFGIT PQGQIVGQTV 
SDKTLREVVD QPRRFEPPGT VAQTRIDLGD DKELLVLEAQ PDPTRRPYIF DGRPYQRVGS
TTSVMPQETY HRLLAERPDS RTRWETLRAE GYGVADLDQE EILRTVRLGV AAGRLPESTG
GDIPDILHRL ELLKGGRLNN AAIVLFGTCF LPDYPQCQLR MARFRGVDKS EFLDQRQIEG
HAFALLDEAM LFLRRHLPVA GRVVPGLFER EDEPLFPLEV LREALVNAFC HRDYTIAGGA
VSLAIYDDRL EIWSDGTLPS GLTPEDLKRD HTSKPSNPLI AKVFYLRGVI ERWGRGTQKI
VELCVKAGHP EPEFGEQAGS VWVRFVPSGY IAPHRVAHDL TERQREVLQI TAHHGPIPLR
EIMQQMASPP ASATVRDDLY HLKRLELVDS AGHGRGAVWR LRREESS