Gene Acel_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0788 
Symbol 
ID4486222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp870043 
End bp870384 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content68% 
IMG OID639729559 
Producthistidine triad (HIT) protein 
Protein accessionYP_872547 
Protein GI117927996 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.927193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0285897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACT GTCTTTTCTG CCGCATCGTC GCGGGTGACG TGCCCGCAAC CATCGTGCGC 
GACTCGGCGC GAACCCTCGC GTTCCGCGAC ATTGCACCGC AGGCGCCGAC GCACGTCTTG
GTCATCCCCA AGGAGCACTA CGACGACCTG CCTGCACTGA CCGCCACGGA TCTCGATCTG
GCCGCCCAGC TGCTCCACGA CGCTCACCGG GTGGCGGCGG CCGAAGGGCT CGTCGAAACC
GGCTACCGGC TTGTCATCAA CACCGGCCGG GACGCCGGTC AGACCGTGCC GCACGTCCAC
GTCCACGTTC TTGGTGGGCG GGCGCTCGGC CGGCTCGGTT AG
 
Protein sequence
MSDCLFCRIV AGDVPATIVR DSARTLAFRD IAPQAPTHVL VIPKEHYDDL PALTATDLDL 
AAQLLHDAHR VAAAEGLVET GYRLVINTGR DAGQTVPHVH VHVLGGRALG RLG