Gene Acel_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0727 
Symbol 
ID4486475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp798401 
End bp799210 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID639729497 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_872486 
Protein GI117927935 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0263256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGT TCACCCGTGG TCGCCGCCGC GTCACCAGCC GCTGGCCGGC CCACCCTGAC 
TCGTACCGCG ACACGTTCCC TGGTGCGGTC ACGCCCATCG ACCGACCCGG TGAGGCGGTT
CCGGCGGAAA TCCCCGCGGT CTGCCCAACC GGCGCCATCA GCCGGGACGG AGACCGGCTC
CACGTCGATC AGGGTCGGTG CATTCTCTGT CACCGCTGCG TGCGGCAGTA TCCGGAGCGG
TTCCGGTTCA CCATTCCTGC GCCGGCGGCG CACCGGGACC TCCTCGTCGT CCCCGCACTC
CCGGAAACGG ACGACGCCCT CGCTGCGGTC CGCGCCGAGC TGGCCCGCCG GACCCGGCTG
CTGCGCCGAT CCATCCATGT CCGGCACGTG GACGCCGGTT CCGACGGCGC CGATGAGTGG
GAGGTCCTTG CCCTGCTCAA TCCGGTGTAC GACATCCACC GGCTCGGGAT TTTCTTTACC
GCATCCCCCC GGCACGCCGA CGTCCTGCTG GTCACCGGCG TCGGGTCGCG GGGAATGGCC
GCGCCGCTGG CCCGAACTCT CCAGGCCGCG CCGCGGCCGT TGGTCGTCAT CGCAGCGGGC
ACCGATGCGA TCAGCGGCGG GTTGGTCCAT CCGACGTACG CGACCAGCGG GGGAATCGGC
GACCTCATCG CGGCGACCCC GGACTCGGCG GGTGCCACGG GTGCCGCGGA CGGCGATCCC
GTACGGGTCG ACATCTGGGT GCCCGGCTCG CCGCCTACGC CGTTCGCCCT GTTGCACGCG
CTTCTCCTGG CCATGGGACG GTTGCAATGA
 
Protein sequence
MPWFTRGRRR VTSRWPAHPD SYRDTFPGAV TPIDRPGEAV PAEIPAVCPT GAISRDGDRL 
HVDQGRCILC HRCVRQYPER FRFTIPAPAA HRDLLVVPAL PETDDALAAV RAELARRTRL
LRRSIHVRHV DAGSDGADEW EVLALLNPVY DIHRLGIFFT ASPRHADVLL VTGVGSRGMA
APLARTLQAA PRPLVVIAAG TDAISGGLVH PTYATSGGIG DLIAATPDSA GATGAADGDP
VRVDIWVPGS PPTPFALLHA LLLAMGRLQ