Gene Acel_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0724 
Symbol 
ID4486472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp792760 
End bp793974 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content70% 
IMG OID639729494 
Productmajor facilitator transporter 
Protein accessionYP_872483 
Protein GI117927932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGACCA CTGTTGAGCA GCAGCGTTGG CTCACTCCGG GCGTCGGCAG TGTGGGCGCG 
GCCAGCTTTT TCAGCGACGC CGGGCACGAA ATCGCCACCG CCGTCTTGCC GAGCTTCCTC
ACCGGCGTCT TGCACGGCTC GGCGGCTGCG CTCGGACTGA TTGAGGGGTT CGCTGATGCG
TTGACCGGCG TAGCCAAACT GCTCGGCGGC CCGCTTGCCA ACGATCCTGC CCGCCGCAGG
CGGCTTGCCA CCGGAGGGTA TCTCGGAACG GCGTTGGCCA CCGGCCTTAT CGGGGCGGCG
ACGGCCGTGT GGCAGGTTGG GGTTCTGCGT GCCCTCGCCT GGACGTCCCG TGGCATCCGC
TCCCCGTCCC GTGACGCGCT GCTGGCGTCG GTGGCACCCA GCCACGCGTA CGGGAGGGCG
TACGGCCTGG AGCGTGCCGG TGACAATCTC GGCGCGGTCA TTGGCCCGCT GCTTGCCGCC
GGGCTGGTGG CATGGATCGG TATCCGCCAC GCGCTCTATG TCGCTTTCCT GCCGGGAATT
CTCGCCGCGG TGGCGATTGG CGTGGCGGCA CGCGAAGCCA GCGCCCGTGA CTCCGTGCGC
CGGGAGCGAC CGCGGTTCGC CTGGCGGGCT CTGCACGAGG CCGGGGTGAT TCGTGCGCTC
TTGCCCATCG CGCTCTTCGA ATTCGGCAAC GTGGCGACGA CCCTGCTCAT CTTGCGGGCG
ACCCACGTGC TCACCGGTCA CGGCGAAACG GCGACTGCTG CGGCGAGTCT GGCGATTCTC
ATTTATGCGG CGCACAACGC GTTCGGTTCG GTGGTCGCCC TCGCCGCCGG GCGATGGGTC
GACCACGCGG GCCCCGCGCC GGCATTCGCC GCCGGCGGCG CGCTGTACGT GCTGGCCTAC
GCCGGTTTCG CCGTCGGTGT GGCGGCGTGG TGGTGGCTGC TGGCGGCCTT CATCCTTGCC
GGCGCGGGAA TCGGGCTTGC CGAGACCGCC CAATCGGCGC TCTTCGCCGC TCTGCTGCCT
GACCGGTTGC GCGGCAGCGG ATTCGGCGTG CTCGGCGGTG TCCAGGCGCT GGGCGACCTT
GTCGCGACCG CCGTCGTCGG AATTCTCTAC GCAACCGTCT CCCCGGCCGT TGCCTTCGGC
TATGCCGCGG CGTGGATGGC GGCAAGCGTT GTCGCGACGG GACTCCTCAA CCGCCGGCGC
CAAGCGAGCA GGTAA
 
Protein sequence
MATTVEQQRW LTPGVGSVGA ASFFSDAGHE IATAVLPSFL TGVLHGSAAA LGLIEGFADA 
LTGVAKLLGG PLANDPARRR RLATGGYLGT ALATGLIGAA TAVWQVGVLR ALAWTSRGIR
SPSRDALLAS VAPSHAYGRA YGLERAGDNL GAVIGPLLAA GLVAWIGIRH ALYVAFLPGI
LAAVAIGVAA REASARDSVR RERPRFAWRA LHEAGVIRAL LPIALFEFGN VATTLLILRA
THVLTGHGET ATAAASLAIL IYAAHNAFGS VVALAAGRWV DHAGPAPAFA AGGALYVLAY
AGFAVGVAAW WWLLAAFILA GAGIGLAETA QSALFAALLP DRLRGSGFGV LGGVQALGDL
VATAVVGILY ATVSPAVAFG YAAAWMAASV VATGLLNRRR QASR