Gene Acel_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0718 
Symbol 
ID4485140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp785763 
End bp786788 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID639729488 
Productinner-membrane translocator 
Protein accessionYP_872477 
Protein GI117927926 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.303584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAC CTCGCACCGC GACGGCGCCC GAACGGACCA CTCCGCTCGG GCGCCGTCGC 
TCGGCCTCAG CTCGTGAAAT ACTCCGCGCC CACCCGACCC TCGGGCCCCT CGTGGTGCTC
GTGGTGTCGG TGGTCGTGTT TGGGCTCATC AATACGCGGT TCTTCAGCCC GGCAAACCTC
TCCATCATGC TGCAAGAAGT CGCGGTCATT GGTTTGCTGG CCCTCGGTCA GACCATCATC
ATCCTCACCG CCGGAATCGA TTTGTCCGTC GGCGCGGCGA TGATTCTGGC GCAGATGGTG
ATGGCCGGCA CCGAAGTCAA CAGCGGCGTC CCCGCCGGTC TTGCGCTGGT GATCGGCCTG
CTCGTCGCTC TGCTCACCGG GCTGGCGAAC GGCTTTCTCG TCACCCGGCT GCGCGTACCG
CCGTTCATCG CCACCCTCGG CACCCTCGGT GTCTTCACCG CCGCCGGCCT TAAGTACGCC
AACGGGCAGA CGGTGAATCC GCCGCAGTCG AGCATCCTGC TCTGGTCCGG AAAACTCTTC
GGCGCCGGGA GTTTCCGGAT CACCACCGGC GTCGTCACCA TGCTCGTGTT CTACCTGGCA
TTCGCGTACA TTCTGGGCCG GACGGCGTGG GGCCGGCACG TGTACGCCGT CGGTGACGAC
ATCGAAGCCG CCCGGCTCTC CGGAATTCAC GCCAGCCGAG TGCTGCTCAG CGTTTACCTC
ATCGCCGGTC TCATTTACGG CGTCGCGGGC TGGGTGCAGA TCGGCCGGGT GAGCAGCGCA
AGCACCAACA TTTCGCCGAC GTTGAATCTC GACAGCATCA CCGCCGTCGT CATCGGTGGG
GTGAGTCTGT TCGGCGGACG CGGCGCAGTC CTGGGCACCC TCCTCGGCGC GCTCATCGTT
CAGGTCTTCC AGAACGGGCT TGCCTTGGCC GGCGTCCAGG AGCTCTACCA GCAACTTGCC
GAAGGACTGC TGGTCATCGC GGCGGTGAGC GTCGACCGGT GGATTCGAGG GGAGACCCGA
CAGTGA
 
Protein sequence
MTEPRTATAP ERTTPLGRRR SASAREILRA HPTLGPLVVL VVSVVVFGLI NTRFFSPANL 
SIMLQEVAVI GLLALGQTII ILTAGIDLSV GAAMILAQMV MAGTEVNSGV PAGLALVIGL
LVALLTGLAN GFLVTRLRVP PFIATLGTLG VFTAAGLKYA NGQTVNPPQS SILLWSGKLF
GAGSFRITTG VVTMLVFYLA FAYILGRTAW GRHVYAVGDD IEAARLSGIH ASRVLLSVYL
IAGLIYGVAG WVQIGRVSSA STNISPTLNL DSITAVVIGG VSLFGGRGAV LGTLLGALIV
QVFQNGLALA GVQELYQQLA EGLLVIAAVS VDRWIRGETR Q