Gene Acel_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0639 
Symbol 
ID4486017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp693800 
End bp694519 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID639729407 
ProductHAD family hydrolase 
Protein accessionYP_872398 
Protein GI117927847 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0512419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TTGCCGCCGT CACCGTTGAT CTCGATGACA CGCTCTTCGA CCAGCGTGCG 
TGGCTGGACG GCGCCTGGCA GGCGGTGGCG TCCGCGGGGT CAGCGTTTGG ACTCGAGCCG
ACTACCCTCC TGGCCGCGCT GCGCCGGATC GCTGCAGAAG GCAGCGACCG CGGCAAGATC
ATAGACCGGG CGCTGCTTGC GGTCGGCGTT CCGGAGTGGG AGCTGGCCGC TCTGGTGCCC
GGTCTGGTCG GCGCGTTCCG GTCCCATGCG CCGACCACCC TGCCCTGCTT TCCCGGTGTC
GCCGAGGCGC TGGCCGATGT CCGGAGGCTG ATCCCGGTGG GGTGCGTTAC CGACGGTGAC
CCTCACATCC AGCGGGCGAA GCTCCGCGCC CTCGGCCTGC GCGATGTGTT CGACGTCGTC
GTGTACTCCG ATGAACTGGG GCGTGAACAT CGCAAGCCGT CGCCGGTGCC GTTCCGGCAC
GCGCTCGCCG CTCTCGGCGT ACCGCCGGAG CATGCGGTTC ACATCGGGGA CCGGCCCGGG
AAGGACGTCG CCGGGGCCCG TGCAGCGGGG ATGCGGGCGA TCCGGGTGTA CACCGGTGAG
TACGCCGGCC AGCCTGATGA TCCCGAGCCG TGGCGGGCGT TCCCGGACGC CGGGGCGGCG
CTCCGGTGGC TGGTTCGGCA GCTGGCCGGC GTGCCGGCGG GCAGCCGTCT GGCAGACTGA
 
Protein sequence
MSDIAAVTVD LDDTLFDQRA WLDGAWQAVA SAGSAFGLEP TTLLAALRRI AAEGSDRGKI 
IDRALLAVGV PEWELAALVP GLVGAFRSHA PTTLPCFPGV AEALADVRRL IPVGCVTDGD
PHIQRAKLRA LGLRDVFDVV VYSDELGREH RKPSPVPFRH ALAALGVPPE HAVHIGDRPG
KDVAGARAAG MRAIRVYTGE YAGQPDDPEP WRAFPDAGAA LRWLVRQLAG VPAGSRLAD