Gene Acel_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0620 
Symbol 
ID4486402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp670521 
End bp672074 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content64% 
IMG OID639729387 
Productdiguanylate cyclase 
Protein accessionYP_872379 
Protein GI117927828 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0089586 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACGAA CACAGGACAT CGACTTGGTG CCGCTCAGCG AACGGCTCCG GACTACCCAG 
CTGTGTCGGT ATGGCCTCGG TGTGGTGATG GTGCTGCTGT GGTACGCCGT CCCGCAATAT
CGAGGCCTGC CGCTTGTCTC GCTCGCGGGA TTCACGGCCG GATATCTCGC GGTGACAGCG
CCGACCGCGT ACGCCGCACG ACTGTCACGG CGAACGATAC TCACGGTCTT CAGCGCGTCG
CTCGTCATCG ACGGGATATA TCTGGCGATC ACCAGCTATG CCACAACCGG ATACGTGTCT
CCCCAGGTCA CCCTCGTTCT GGTGCACGCC GTAACGGTTA CGCTGCTGGC ATCCTTTCGC
ACCGGCTTGA AAATCGCGGT CTGGCATTCC CTGCTTGCCT TCGTCGTCTA TCAATACCTG
AGGGCGGGGG TGCTCCATTC TCCGCACCAC TCGACCGGGG CGGAGGTGGG CGCTTTCGTC
GCCGCGGTAT GGCTGGTCAC GCTGGCGACC GCCGCGTTCG CCTCCGTGAA CGAACGCGAG
TTGCGCCGCC GCAACTACGA TCTTCTTGGG CTGGCTCGAC TTTCTCAGCG CTTGGAGGAA
GCTCTCCATC CCGCCGACGT CGGTCGCGTG CTTGTCGAAG CGGTGCACGA CGACTTTCTC
GCACCTCGAG CGGCAATCGT CGTCAAGAGC GGCCCGGGCG ACGTCATCCT GGCCTCGGTC
AAGACGACAC CGAACCGACT GTCACCCGCG GAAGACCGCT CTATTCAATC GGTTCGCCGC
GAACGGCGGA CGTGGCGGCT GGGGCATATC GACCGACACC GGGATCGATG GCTTGCGGCC
AGCTTTCCCG GGGCCCAGCG CCTCCTCCTC GTCCCCATGT CAGCCGGCAA CAACGTGGAC
GGCGTACTGG TGGCCGAGCA CAATGCCCGT TTCGGTTCGC GGGTTGACCG GCGCGTCGTC
GCAATGCTGG AACGTTACGC GTCGCAAACA GCGCTCGCGC TGGCCAACAG CTGGCTGCTC
GAGCAGATCA CATTGCTTGC CGCGACTGAC ATGCTCACCG GAGTAGCGAA TCGGCGTACT
CTCGAAGAGA ATCTCGACCG GATGTTCGCT CAAGCGAGTC GGGCGGCACA ACCGATATCC
GTCGTCATGG TCGACATCGA CCATTTCAAG CACATCAATG ACACGTTCGG ACATCAAGTC
GGCGACCAGA CGCTCCAGCG GGTTGCCCGC GCACTCCAGC AGGGGTGCCG GAGCTCTGAC
CTCGTCGCCC GGTACGGCGG GGAGGAATTC GTCGTTGTGC TGCCGGACAC CGATCTCGCC
GGCGCTGCCA CCGCAGCGGA GAATCTTCGC CGCCGAATTT TCGGTCTTGA CGCCGAACCG
CGCGTTACGG TGAGCCTCGG GGTCGCGACC TTCCCCCTGC ATGGCGGATC ACCGGATCAC
ATTCTTTCGG CTGCCGACGC CGCCCTCTAT CAATCGAAAT CAGCCGGCCG CAACCGGGTC
ACTCTCGCGG GAGTGGGGAG CCAGGTCCTG CCTGGCTCCC CACAACCCGC ATAG
 
Protein sequence
MARTQDIDLV PLSERLRTTQ LCRYGLGVVM VLLWYAVPQY RGLPLVSLAG FTAGYLAVTA 
PTAYAARLSR RTILTVFSAS LVIDGIYLAI TSYATTGYVS PQVTLVLVHA VTVTLLASFR
TGLKIAVWHS LLAFVVYQYL RAGVLHSPHH STGAEVGAFV AAVWLVTLAT AAFASVNERE
LRRRNYDLLG LARLSQRLEE ALHPADVGRV LVEAVHDDFL APRAAIVVKS GPGDVILASV
KTTPNRLSPA EDRSIQSVRR ERRTWRLGHI DRHRDRWLAA SFPGAQRLLL VPMSAGNNVD
GVLVAEHNAR FGSRVDRRVV AMLERYASQT ALALANSWLL EQITLLAATD MLTGVANRRT
LEENLDRMFA QASRAAQPIS VVMVDIDHFK HINDTFGHQV GDQTLQRVAR ALQQGCRSSD
LVARYGGEEF VVVLPDTDLA GAATAAENLR RRIFGLDAEP RVTVSLGVAT FPLHGGSPDH
ILSAADAALY QSKSAGRNRV TLAGVGSQVL PGSPQPA