Gene Acel_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0572 
Symbol 
ID4485236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp602318 
End bp603025 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content60% 
IMG OID639729339 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_872331 
Protein GI117927780 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.574105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAC GACACTGGAC GGCCGAGACG ATAACGATCG AGGAGGCGGC CAAGTTCATT 
GATCACTCGT TGCTTCGACC AGAGCTGACC GTCGCCGACG TGCAGGCAGG CTGTGAGACG
GCAATGAAGT ATGGCGTCGC GAGCGTATGT TGCCGTCCCA TCGACGTGCC GCTCTGTGTG
AGGGAGCTCG CGGGCACCGG GGTGGTCGTC GGCACAGTGG TCGGTTTTCC GCACGGCTCG
CACACTACTG CCACCAAGGT TGCAGAAACG CGACGTGCGA TCGATGACGG AGCCCGGGAG
TTTGACATGG TTATCCAAAT CGGTATGCTT CGCTCGGGTC GCTATCGCGA GGTTCATGAC
GATATCGCGG CCGTTGTCGA CGCAGCCGCA GCTGTCGACG GCGCGGTGAA GGTGATACTG
GAGACGGCTT TCTTGACGAA GGAAGAGAAG ATTCAGGGGG CGAAACTGGT TGAGGAGGCA
GGCGCTGCAT TTGTCAAGAC GTCAACAGGC TTTGCACCGT CGGGTGCGAC CGTTGAAGAC
GTTGAGCTCT TGCGGTCAGC GGTGTCGCCA AAGGTGAAGG TGAAGGCCGC TCATGGTATC
CGGACGCTGG ATGTCTTTCT TCAGATGATC AATGCTGGCG CTGACCGTGT CGGCGCCACT
GCCACGTCAA GGATTCTGGA CGACCTGCGT GCGCGTAAGG GAGTGTGA
 
Protein sequence
MQERHWTAET ITIEEAAKFI DHSLLRPELT VADVQAGCET AMKYGVASVC CRPIDVPLCV 
RELAGTGVVV GTVVGFPHGS HTTATKVAET RRAIDDGARE FDMVIQIGML RSGRYREVHD
DIAAVVDAAA AVDGAVKVIL ETAFLTKEEK IQGAKLVEEA GAAFVKTSTG FAPSGATVED
VELLRSAVSP KVKVKAAHGI RTLDVFLQMI NAGADRVGAT ATSRILDDLR ARKGV