Gene Acel_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0569 
Symbol 
ID4485233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp599123 
End bp600460 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content59% 
IMG OID639729336 
Productfumarate reductase/succinate dehydrogenase flavoprotein 
Protein accessionYP_872328 
Protein GI117927777 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGAC GACCTATCGA CCTCGGTGAA TTCGATGTCG TGGTCGTTGG ATCTGGCTCG 
GCCGGAAGTG CGGCGGCGAT TGCGGCTGCT CGACAGGGTG CCCGCACGTT GGTCGTTGAA
AAGTTGCCCT TTCTCGGAGG CGTCTCCACC GCCGTGCTTG ACACGTTTTA CGGGTTCTAC
ACTCCCGGTG AAGTTGCGCA TAAAGTCGTG GGGGGGATCG CGGACGAAGT GGTTGCTGAG
CTGCGCCGCC TCGGTACGGT GGTCGAGCGG CCCAATACGT ACGGTGCTGG AACGGGAATT
ACGTACCTTC CAGATCATTT GAAGATCGTA TGGGAGCGCC TGGTCACCGC TGCGGGCGCG
CGAGTCTTGC TCCACGCGAT GGTGCAGGAT GTTGCGGTTG ACAAGGGCCG TGTTCATTCA
ATTGTCGTCG CGACAAAGGC TGGCCTCGGC ATCGTGCGTT GTCGTGTCGC CATTGATGCG
AGCGGAGATG CTGATGTGTG CCATTTTGCC GGATTCAGTT ATGAGCTAGC TGGCCGCGAC
AGTCCTGCAC AATCTTTGAC AACCACGTTC CGATTGGCCA ACGTCGATGT GGATCTCCGT
CGCACGGTCA GCCGTGACGA ACTTCATCGC TTAATGCGAG AAGCTGCAAA CTCCGGCCTA
TATCACCTAC CAAGGCGCGA CGGCTCCGAC CACATCACGC CGATACCGGG CGTCACCGCG
ACCGTCATGA CGCGCGTGCC GGGCGCAGCG GTAAGAGGTG AGGTAACCGT TAACGCAACT
GATCCGTGGT ACCTTACTGA AGTTGAGATA GAGGGCCGCC GACAGGTTTT GGAATACGCG
CGCTTTCTGA GAGACAAGAT TCCTGGATAC GCAAACTCGC ACTTGGTTGC GATGAGTACC
CAGATAGGGT TGCGCGAGAC GCGTCGAATC CGCGGTGAAT ACGTGCTGAC AGCAGATGAC
GTTTTGCAGG CACGACAGTT TGACGATCAA GTCGCGCTTT CTGGGGCTCC GATCGAGGAT
CATCGCTCGG ATGACACGAC GCGATGGCAG TATCTACCAG AGGGACGAGT CGTCGGAATA
CCACTTCGTG CTCTTCTCCC TAGGGATGGT GAGAACGTCC TCGTGGTCGG AAGGTGCTTC
TCTGCGACGC ACGATGCGCA CGCAGCGGTC CGGTCGATGG CGCAGTGCAT GGCGATGGGT
CAGGCTGCGG GAACTCTGGC GGGACTCGCT ACGACAAACT CGCGAGACAT TCGCGACGTC
CACTTCAACG TCCTTAGGGA TCGACTGCGT GACGATGGTG CAATTCTTCT CTTGGACGAA
GGTGCCCCGT GCCGGTGA
 
Protein sequence
MSRRPIDLGE FDVVVVGSGS AGSAAAIAAA RQGARTLVVE KLPFLGGVST AVLDTFYGFY 
TPGEVAHKVV GGIADEVVAE LRRLGTVVER PNTYGAGTGI TYLPDHLKIV WERLVTAAGA
RVLLHAMVQD VAVDKGRVHS IVVATKAGLG IVRCRVAIDA SGDADVCHFA GFSYELAGRD
SPAQSLTTTF RLANVDVDLR RTVSRDELHR LMREAANSGL YHLPRRDGSD HITPIPGVTA
TVMTRVPGAA VRGEVTVNAT DPWYLTEVEI EGRRQVLEYA RFLRDKIPGY ANSHLVAMST
QIGLRETRRI RGEYVLTADD VLQARQFDDQ VALSGAPIED HRSDDTTRWQ YLPEGRVVGI
PLRALLPRDG ENVLVVGRCF SATHDAHAAV RSMAQCMAMG QAAGTLAGLA TTNSRDIRDV
HFNVLRDRLR DDGAILLLDE GAPCR