Gene Acel_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0529 
Symbol 
ID4485112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp563976 
End bp565112 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID639729296 
Productdiguanylate phosphodiesterase 
Protein accessionYP_872288 
Protein GI117927737 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.907499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGG AAGCGACCCG CGGCGCCGTG CCTGCCGAGG GGAGCATCGA AGCCTGTGCG 
CGGTTGCTCC CCGGGTTGCT GCGTGATCCC GAGCAGCCGC GCCTGGTGTT TCAGCCGATC
GTGGATCTCG ATCGCGCGGT GGTCGCAGGG TACGAAGCGC TCGCTCGCTT CGCCGTGTCG
CCTCCGGTCG CGCCGGATGT CTGGTTCGCC GCCGCGGCGG CCGGCGGGCT CGCCGCCGAA
TTGGAACGGC GAGTCGTGCG CCGGGTCCTT GCGGCGCGGT CTCACCTGCC GCCGAACTGC
TTTCTCACCG TCAACGTGTC CCCGCAGGCG TTGACGACCG ATGACGTTCT CGACGAATTC
CGGCACGGTG GAGACCTCGC CGGCATTTTT GTCGAGCTGA CCGAGCAGCA GCACGTCCTG
GATCTCGCCG CGACCCACAA GGCGCTGGAG GAATTGCGGC AGCACGGGGC CATGATTGCG
ATGGACGACG CCGGTTCCGG CTATTCGGGA CTCCAACGGC TCGTCGCCCT TCGCCCGGAA
CTCATGAAAA TTGACCGCTC ATTGGTCAGC GGTATTGACA GCGACGAAGC GAAGAAGGCA
TGTGTCGAGA TGCTGCGTGT CCTGGCCGGG CGGCTGGACG CCTGGCTTCT GGCCGAGGGT
GTCGAGACTC CCGAGGAACT CCGCACCCTC GTCAGTCTGG AAGTCCCGCT GGCGCAAGGT
TTTCTTCTTG GTCATCCGGT AGACGACTGG CGCGGGCTGG ACGCCCGGAC CACGGCGCGC
ATTCGCGTGG CAGCCCGGGA GCTTCTCGGT TCCCGCCAAC TGGTCCGATT GGTGGAGCGG
GTGGCCATCC GGACGCCGGA GGCGGCCGAA CCGCCGGGTT CATCGGACGT CGTTGTCTGC
CTGGACGGCG ACGGCCGGCC GGCATCGCTG TTGATTAACA GCGACGCCGG CCGGCCGCGG
ACCGTCCCCG TTACGCTGCA GCTCCCGGCG ACGACTCCGA TCACTGAAGC GGCGCGACAA
TGTCTCGATC GCCCGCAGCC ATACCGGTTC GATCCGGTGC TCTGCGTGCA CGAGGACGGG
ACCGTCGCCG GAATCGTGCA CGCGGAACGA ATTTTTGACT TTCTCACTCG CCGCTGA
 
Protein sequence
MPTEATRGAV PAEGSIEACA RLLPGLLRDP EQPRLVFQPI VDLDRAVVAG YEALARFAVS 
PPVAPDVWFA AAAAGGLAAE LERRVVRRVL AARSHLPPNC FLTVNVSPQA LTTDDVLDEF
RHGGDLAGIF VELTEQQHVL DLAATHKALE ELRQHGAMIA MDDAGSGYSG LQRLVALRPE
LMKIDRSLVS GIDSDEAKKA CVEMLRVLAG RLDAWLLAEG VETPEELRTL VSLEVPLAQG
FLLGHPVDDW RGLDARTTAR IRVAARELLG SRQLVRLVER VAIRTPEAAE PPGSSDVVVC
LDGDGRPASL LINSDAGRPR TVPVTLQLPA TTPITEAARQ CLDRPQPYRF DPVLCVHEDG
TVAGIVHAER IFDFLTRR