Gene Acel_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0483 
Symbol 
ID4484805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp517176 
End bp518456 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID639729250 
Productmajor facilitator transporter 
Protein accessionYP_872242 
Protein GI117927691 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.964479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA CATCAACGTC CACGGTGGTG CCTGCGACGA CGTCTTCGGG ACCGGAACGG 
GCAGCGCTGC GGAGCGCCGA CGTCGTTGTG TTGTCCATCG GAACCTTTAC CCTCGGCGTC
GACGGGTTCG TACTGTCCGG CCTCCTCCCG CGTGTCGCCA GGTCACTGCA CGTCACGGTC
AGTACAGCGG GCCAACTCAC CACTCTCTTC GCCCTTGTCT ACGCTGTCGG CTCCCCGCTT
ATCGCCACCC TTACCGGCAG CTGGGATCGT CGCAGGGTGC TAGCCGCTGG GATGAGCGTG
TTCATCTGCG GAATGATCAT CCAGGCCACC GGAACAGACT TCGCCGCCGT GGCCGCTGGC
CGGGTCCTCG CCGCTCTCGG TGCCGCCGGG TACCAAGCAA CTGCCTACAG CACCGCCGGC
ATCCTCAGCG ACGATCGGCA TCGAGCCCGG TCGCTCGCCA TTGTGGCCGG CGGCAGCTCG
GCTGCGCTCG TCGCCGGCCT GCCCTTCGGC ATCTTGGTCG GTCAGATGTG GGGATGGCGG
TCGGCCATGT GGGTTCTGGT CGTCCTCGCA GTTGTCTCGG CGATCGCGGT GCGTCTCCTT
CCCCCCGCTC ACGCCCCGGC ACTCGGGCTG CGCCAACGGG CCCTGGCCCT GACGGACCGT
CGGGTGCTCG GCGTCCTCGC TGGCACCGTC ACCGTCTTGA CCCCCGCCTT CGTAGTGATC
GCGTACCTGC CGGCCATCGT GCAGACCGGG GGTGCCTGGA TCGTGGCGGC CATGCTCGCG
TACGGAAGCG GGCAGGTTAC CGGAACCAGT GTCGTCGCCC GCCTCATCCG GCAGCGAAGC
GCAAGAACCA CCTACGTGGT CGGTGCCGTC GGCGTCACGG TCACTGTTGC AATGCTCGCC
GCGACGCGCC ACTGGCTCCC GGTCGCCGTC GGGACGATGG CCGCGCTTGG CTTGTCGGTC
GGGCTAACCA TCGTCCCCCA GCAGCACCGA CTCTTCGCCA CCGTGCCGGC ATTGGCCTCC
GTCGCCGTTG GGCTCAATGG TTCATCCATC TACGTCGGTA CCGCCATCGG TGCTGCGGTT
GGCGGCATCG CCCTAGCCGG CGCCGGTTCA GCTGCCCCCG CGGTCGCTGC CGCCGCGATC
GGAGTTGTCG CCGTCGCGCT CGGCGTGTGG GTGGTACCCG AGCGGATGTC CAGGCCTCAA
CCAACCCTCA TCGACGCTGC CAGCGATTGG CACGTCGAGC GGATGGTGGC TGAGAACACC
TCGATCGACG CGTGCCGCTA G
 
Protein sequence
MTETSTSTVV PATTSSGPER AALRSADVVV LSIGTFTLGV DGFVLSGLLP RVARSLHVTV 
STAGQLTTLF ALVYAVGSPL IATLTGSWDR RRVLAAGMSV FICGMIIQAT GTDFAAVAAG
RVLAALGAAG YQATAYSTAG ILSDDRHRAR SLAIVAGGSS AALVAGLPFG ILVGQMWGWR
SAMWVLVVLA VVSAIAVRLL PPAHAPALGL RQRALALTDR RVLGVLAGTV TVLTPAFVVI
AYLPAIVQTG GAWIVAAMLA YGSGQVTGTS VVARLIRQRS ARTTYVVGAV GVTVTVAMLA
ATRHWLPVAV GTMAALGLSV GLTIVPQQHR LFATVPALAS VAVGLNGSSI YVGTAIGAAV
GGIALAGAGS AAPAVAAAAI GVVAVALGVW VVPERMSRPQ PTLIDAASDW HVERMVAENT
SIDACR