Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0483 |
Symbol | |
ID | 4484805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 517176 |
End bp | 518456 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639729250 |
Product | major facilitator transporter |
Protein accession | YP_872242 |
Protein GI | 117927691 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.964479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA CATCAACGTC CACGGTGGTG CCTGCGACGA CGTCTTCGGG ACCGGAACGG GCAGCGCTGC GGAGCGCCGA CGTCGTTGTG TTGTCCATCG GAACCTTTAC CCTCGGCGTC GACGGGTTCG TACTGTCCGG CCTCCTCCCG CGTGTCGCCA GGTCACTGCA CGTCACGGTC AGTACAGCGG GCCAACTCAC CACTCTCTTC GCCCTTGTCT ACGCTGTCGG CTCCCCGCTT ATCGCCACCC TTACCGGCAG CTGGGATCGT CGCAGGGTGC TAGCCGCTGG GATGAGCGTG TTCATCTGCG GAATGATCAT CCAGGCCACC GGAACAGACT TCGCCGCCGT GGCCGCTGGC CGGGTCCTCG CCGCTCTCGG TGCCGCCGGG TACCAAGCAA CTGCCTACAG CACCGCCGGC ATCCTCAGCG ACGATCGGCA TCGAGCCCGG TCGCTCGCCA TTGTGGCCGG CGGCAGCTCG GCTGCGCTCG TCGCCGGCCT GCCCTTCGGC ATCTTGGTCG GTCAGATGTG GGGATGGCGG TCGGCCATGT GGGTTCTGGT CGTCCTCGCA GTTGTCTCGG CGATCGCGGT GCGTCTCCTT CCCCCCGCTC ACGCCCCGGC ACTCGGGCTG CGCCAACGGG CCCTGGCCCT GACGGACCGT CGGGTGCTCG GCGTCCTCGC TGGCACCGTC ACCGTCTTGA CCCCCGCCTT CGTAGTGATC GCGTACCTGC CGGCCATCGT GCAGACCGGG GGTGCCTGGA TCGTGGCGGC CATGCTCGCG TACGGAAGCG GGCAGGTTAC CGGAACCAGT GTCGTCGCCC GCCTCATCCG GCAGCGAAGC GCAAGAACCA CCTACGTGGT CGGTGCCGTC GGCGTCACGG TCACTGTTGC AATGCTCGCC GCGACGCGCC ACTGGCTCCC GGTCGCCGTC GGGACGATGG CCGCGCTTGG CTTGTCGGTC GGGCTAACCA TCGTCCCCCA GCAGCACCGA CTCTTCGCCA CCGTGCCGGC ATTGGCCTCC GTCGCCGTTG GGCTCAATGG TTCATCCATC TACGTCGGTA CCGCCATCGG TGCTGCGGTT GGCGGCATCG CCCTAGCCGG CGCCGGTTCA GCTGCCCCCG CGGTCGCTGC CGCCGCGATC GGAGTTGTCG CCGTCGCGCT CGGCGTGTGG GTGGTACCCG AGCGGATGTC CAGGCCTCAA CCAACCCTCA TCGACGCTGC CAGCGATTGG CACGTCGAGC GGATGGTGGC TGAGAACACC TCGATCGACG CGTGCCGCTA G
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Protein sequence | MTETSTSTVV PATTSSGPER AALRSADVVV LSIGTFTLGV DGFVLSGLLP RVARSLHVTV STAGQLTTLF ALVYAVGSPL IATLTGSWDR RRVLAAGMSV FICGMIIQAT GTDFAAVAAG RVLAALGAAG YQATAYSTAG ILSDDRHRAR SLAIVAGGSS AALVAGLPFG ILVGQMWGWR SAMWVLVVLA VVSAIAVRLL PPAHAPALGL RQRALALTDR RVLGVLAGTV TVLTPAFVVI AYLPAIVQTG GAWIVAAMLA YGSGQVTGTS VVARLIRQRS ARTTYVVGAV GVTVTVAMLA ATRHWLPVAV GTMAALGLSV GLTIVPQQHR LFATVPALAS VAVGLNGSSI YVGTAIGAAV GGIALAGAGS AAPAVAAAAI GVVAVALGVW VVPERMSRPQ PTLIDAASDW HVERMVAENT SIDACR
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