Gene Acel_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0471 
Symbol 
ID4484792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp505899 
End bp507065 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID639729238 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_872231 
Protein GI117927680 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.655951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGG AGCGGGACGG CGGGCATGTG CCCAACGCTA GTCGCGGAGA CGGGACGGAT 
GGCGGGGCCG GCCGGACGAT TCGCCGACAG CGCAGCCGGG TCCGGTGCGT GGCGGTCACC
GGGGCGGCGC GCCCTCTTGG CGATCGGCTG GTCCGGGCGC TGCTGGCGAG CGGATCGGTG
CGCAAGACGA TCGCGATCGA TACGATCCGC GGCGAGAGTG AGGCGACGTG GCGGCTTGCC
GACCCCCGCG ACCCGGCTCT GGCGGACCGA CTGCGGGGGG TGGACACGCT GGTCCACCTC
GCCATCGACA GCGGGGTTGG CGCCGATCGG GCTTGGCAGG AATCGCTGAA CGTGCACGGC
ACGGCCGCCG CGCTCACGGC CGCCGCGGCG TCCGGCGTCC GCCACGTCGT GATCGTGACG
AGCGCCCAGG TGTACGGCGC GTCGCCGGCG AATCCGGTAC CGCTGGACGA AGACGCCGAG
GTGCGGGCGC TGCCGGAGAG CGGCCTGCTT CGGGATTTGC TCGAGATGGA GCGGCTCGCG
GCGCAAGCCC CGCGCACCCA TCCGGGGCTT TCGGTGAGCG TCGTGCGCCC GGCGGCCGTG
GTCGGTCCCG GGGTGGACAC GGTCATCACC CGGCACTTCG AAGGACCGCG GCTGTTGGGT
GTGAAAGGTA CGGCGACCTG CTGGCAGTTC TGCCACGTCG ATGACTTGAT TTCCGCACTG
GTACGGATCG CGCTCCGTGA TCTCGACGCC GGCGGCGAGG AACGATATGC GGTTTTTGCC
GTTGGCGCCA AGGGATTTCT CACCCGGGCG GAAGTCGAAC GGTTGAGCGG AAAACGCCAC
GTTGACCTTC CCGCGTCGGT GGCGTTCGGC ACGGCTGAGC GATTGCACCG GATCGGCGTC
ACTCCGGCCA CCGCGGGCGA TCTGCAGTAC CTCGTCTATC CGTGGGTTGT CGAGCCGCGG
CGGATTTTCA CCCTCGGATG GCAACCGAGC TACGACAACG AGGCGGCGCT GCGGCTGCTC
CTGACCGAGA CCGCGGGTCG GTTGACCATC GGTGGGCATC GGCTCGGACG CCGGGACGCC
GCCGCGGGCG CAGCCGTCGG CGCCACGGTC GCGCTGGTCG GGACGGCCGC CCTGGTACGG
CGGGCGCGGA GGCGGCGTCG TGCCTGA
 
Protein sequence
MRAERDGGHV PNASRGDGTD GGAGRTIRRQ RSRVRCVAVT GAARPLGDRL VRALLASGSV 
RKTIAIDTIR GESEATWRLA DPRDPALADR LRGVDTLVHL AIDSGVGADR AWQESLNVHG
TAAALTAAAA SGVRHVVIVT SAQVYGASPA NPVPLDEDAE VRALPESGLL RDLLEMERLA
AQAPRTHPGL SVSVVRPAAV VGPGVDTVIT RHFEGPRLLG VKGTATCWQF CHVDDLISAL
VRIALRDLDA GGEERYAVFA VGAKGFLTRA EVERLSGKRH VDLPASVAFG TAERLHRIGV
TPATAGDLQY LVYPWVVEPR RIFTLGWQPS YDNEAALRLL LTETAGRLTI GGHRLGRRDA
AAGAAVGATV ALVGTAALVR RARRRRRA