Gene Acel_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0469 
Symbol 
ID4484790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp503917 
End bp504408 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID639729236 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_872229 
Protein GI117927678 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.548466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCGGT TGGTTTTTGT CGAGCCCCGG ATTCCGCCGA ATACGGGAAA CGCGATCCGG 
TTGGCCGCGG CGACGGGCTG CGAGCTGCAC CTGGTGGGCC CGCTTGCGTT TGACATGTCC
GATGCGCGCC TGCGCCGCGC CGGCTTGGAC TACCACGAAT TCGCCACCGT CGTCGTCCAC
CCGAACATGG ACGCGGCCTG GGAGGTCCTG GCGTCCGGCA GGATTTTTGC GTTCACCGGG
AGGGCCGAGC GTCCGTACAC CGACGTCGAG TACCGGGACG GCGACGCGCT GATGTTCGGC
ACCGAGCGCA CCGGCTTACC GGATTCGATC CTCACCGACC CCCGCATCAC CGAGCGGGTC
CGCATCCCCA TGCTGCCGGG ACGGCGTTCG CTCAACCTGG CGAACGCCGC CGCGGTCGCG
GTCTACGAGG CGTGGCGGCA GAACGCGTTC CGCCACGCCG GCGGACCCGT CGGCGACGCA
CTCTTCACGT AA
 
Protein sequence
MFRLVFVEPR IPPNTGNAIR LAAATGCELH LVGPLAFDMS DARLRRAGLD YHEFATVVVH 
PNMDAAWEVL ASGRIFAFTG RAERPYTDVE YRDGDALMFG TERTGLPDSI LTDPRITERV
RIPMLPGRRS LNLANAAAVA VYEAWRQNAF RHAGGPVGDA LFT