Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0428 |
Symbol | |
ID | 4485663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 456174 |
End bp | 458675 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639729195 |
Product | cell wall binding repeat 2-containing protein |
Protein accession | YP_872188 |
Protein GI | 117927637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0259753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.43049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGTCG CGCCACACGA CGCCACGGTC AGTCAGTACG CCGCGGTGAG CCCGGACCCC CCGATCGGTC CGGACGCCAC GGTGAGCCCG GACGCCGCGG CTGCGGCGGC TGCGCCCGCC CGGCCGAGCC CCAGCCCCGA CACCCGCCCG GACCCCAGCC CCGACGCCCG CCCGCGCCCC AGCCCCGACG CCCGCCCGCC GGGCCGCCGC CCGGATACCC ACGGCACGGT CGCTGGCGTG CGGGTGCGCT GGTTCCACTA CGCACCGGCC GGCCTCGAAC GGCTCGCCTA CCGTGGGGGA CTCCTCGCCG CGGCACGGTC CCCGGCGGCG CTGCTCATTC CGCCGTTCCT GGCCGCGATG ACCGCCGCGG TTCGCCGCGC GACCCGCGAC TTCCAGCCGG ACCTCATTCA CGCCCACTGG TGGTTCCCCG CCGGTTTCTG CGCCCTCCCG GCCAGCCGCC GCTCCGGCCG GCCGCTCGTC ATCACCGCGC ACGGCTCGGA CCTCCACCTC CTCCGCTTCC CGCCGCTGCG CCCGCTGGCC CGCGCCGTGC TCCGCCACGC CGCGCTCGCC ACCGCCGGCA GCGCCGCCGC TTTTACGGGC GCGGGCGGCG GTGGTATCAG CTCGGCCGGC TCGGTGACCG TTTATCCCGG GTTGACCGGC CAGGCGCTCT CCAACGTCAC GGTCAGCCTG CCGGACGCGA GCGGCGCCGG CTGGTCCGCT GGTGACTTTC TCACCTTCAC GTTGACCAGC GCCGCGGCTA GCACGCCCCA CGTCTGCCAG ACGTCGAGCA ACCTCAACGA GTCGGCCTCG CTGGCGGCTC CGACGGTGAC CGCGGCGAAT AGCGGCACGT CGGCGGCGTT CACCGGGTTC ACCGTGACCC AGGGGTCGAG TAGCACGTGC AATGTCAAGG ACTCTTTTAC AATCGCTTTG ACCAGTGGCG CGCCCAGTGA CACGAATAAC ACGGTGTTCA CGATTTCGGG TTTGTCGTTG ACCCTGGGCT CGGCCATCGC TCCGGGCACG CCTGTGTACG TGTACGTGAC GGCGAGCAAC GGCACGCCGT TCGGAGCAGG CACCGTCGAT GCCGCCGCGC AGGTGGCGAC GGTGTCGGAC GTGTCGGTGA GCACGAGCGT GGTCGGTGCG ACGCCCGGCG CGACGGTAGC GATTAATCCA ATCGTGGTCA CCGACTACGC TCGCGGCACC ATCAACACGC AGATTCAGTT CAAGCTCGCG ACTTCCGGTG TCACTGACAA ATTCGCGACG GCGGGCACGT TGACCGCGCC GTCCGGGGTG ACTTTCACCG GGCCGAGTGA GACGCTGCCA TCGAGCACGC TGACGTATAA GATTACTGGT TCGGTTCCGG CGGGTGGCAA GTTCACCCTG ACCGGCGCCA CCGTCACAGT GGACGCCACA CAGCCCGCCA CCCTAGCTGA TCACGTGGTG CAGGTATGGA CCGGTTCGAC GCTCGGTCAG GTGGGTCCGA ACGCGAATGT CGTGGTCGTC GCGAACACGT CGCGTACCTA CGCCGGTGTT GACCGGTACG CTACGTCGGC CGCTTTGTTC GCCGCCAACC ACAACAGCTA CGCGGTGGTC GCGAGTGGGA TGAGCTACGC GGACGGGCTG TCGGCTGATG TGCTGGCTGC GCATCTGGGT ACCGGTGTGT TGTTGACGGA TCCGAATTCG TTGCCGGACT CGACTCGGCA AGCGCTGATC AACAATGGTG TTGCGATCGT GTACATCGTG GGTGGCACGT CGGCGGTGAG CGCGAATGTG GAGTCGCAGA TCGCCGCGCT GCACGTGTCG AACAACCCGG CCAACCCGTT GATCACCGTG TATCGGATCG CCGGCAGTGA CCGGTACCAG ACCAACATGC AGGTCAACCT CACGGCTGGT CCGACCGGCG GCCGGGCGAT TATCGCGACG GGCACGAATT TCGCGGACGC CCTGGCGGTG AGCCCGGAGG TCTACTCCCA GCACTACGCG CTGGTTCTCA CCGACCCGAA TTCGTTGAGC TCGACCGCGC AGAGCACGCT GACGGACCTG GGTATCACGA ATGTGATCAT CGTGGGTGGC ACGTCGGCGG TGTCGGCGAA TGTCGAGTCG CAGTTGAAGA GCGATGGGTT CACGGTGCTG TACCGGATCG CCGGTGCGGA TCGGACCGGG ACCGCGGCGC AGATCGCGAT CTGGGCGACC GCTGGACTGT CGGCGGCCAA CGGGTACAAC GCGCTGGACA CTGGCGGCCT GGCAACGTTC AAGGGCGCTG CCAATATGGC CACGGTTGAG TTGACGCGTG GGGATGCGTT CCCCGACGCT CTGTCCGCCG GCCCGGCGGT TGGGAACGCG GGTCACGTGC TGCTGCTCAC CGCTAACCCG ACCACGCTCG GGTCTGGCGC CGGCCAGTAC CTGGGCGGCA AGGCGCGCAC TGTGACCACC TTCGACGCGA TCGGCTACTC GGCGGCGGTC AGCCCGTCGG TGCTCACCGC GGCGATCGCG GCGCTCGGCT AA
|
Protein sequence | MVVAPHDATV SQYAAVSPDP PIGPDATVSP DAAAAAAAPA RPSPSPDTRP DPSPDARPRP SPDARPPGRR PDTHGTVAGV RVRWFHYAPA GLERLAYRGG LLAAARSPAA LLIPPFLAAM TAAVRRATRD FQPDLIHAHW WFPAGFCALP ASRRSGRPLV ITAHGSDLHL LRFPPLRPLA RAVLRHAALA TAGSAAAFTG AGGGGISSAG SVTVYPGLTG QALSNVTVSL PDASGAGWSA GDFLTFTLTS AAASTPHVCQ TSSNLNESAS LAAPTVTAAN SGTSAAFTGF TVTQGSSSTC NVKDSFTIAL TSGAPSDTNN TVFTISGLSL TLGSAIAPGT PVYVYVTASN GTPFGAGTVD AAAQVATVSD VSVSTSVVGA TPGATVAINP IVVTDYARGT INTQIQFKLA TSGVTDKFAT AGTLTAPSGV TFTGPSETLP SSTLTYKITG SVPAGGKFTL TGATVTVDAT QPATLADHVV QVWTGSTLGQ VGPNANVVVV ANTSRTYAGV DRYATSAALF AANHNSYAVV ASGMSYADGL SADVLAAHLG TGVLLTDPNS LPDSTRQALI NNGVAIVYIV GGTSAVSANV ESQIAALHVS NNPANPLITV YRIAGSDRYQ TNMQVNLTAG PTGGRAIIAT GTNFADALAV SPEVYSQHYA LVLTDPNSLS STAQSTLTDL GITNVIIVGG TSAVSANVES QLKSDGFTVL YRIAGADRTG TAAQIAIWAT AGLSAANGYN ALDTGGLATF KGAANMATVE LTRGDAFPDA LSAGPAVGNA GHVLLLTANP TTLGSGAGQY LGGKARTVTT FDAIGYSAAV SPSVLTAAIA ALG
|
| |