| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0393 |
|---|
| Symbol | |
|---|
| ID | 4486615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 406276 |
|---|
| End bp | 407673 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639729160 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_872153 |
|---|
| Protein GI | 117927602 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGGC GTAGTGCCCG GTGGGACGCG CGGGCAGGGT GCGGGGTCGG GTGGGATGCG
CGCGCTCATC GGCGGTTTGC CGACACCTGT TCGTCACCCC GAGGCGGGCC CAGCTGCGTT
CGCTACCCTA AGCCGCACAT GCCAGCCATC CCTTGGCGCC GCGCGGGCGG GTACGCCGTC
CTCGTCATCG CCGTTCTTGC GCAGGCCGCA CTCGTCGTTG GTGCCGGCAC GGTGCGGCGT
GCCCGGGCTG ACACGGCAGG TACGCCGCTC GGCGGGCCGC TGCTCGGCGT CCACGGCGTT
GTCACCAGCA CCGGCGAGAA CCTGCCGCCT CTCCCGCCGA CGACCGCGAC ATCGTTCATC
GTGGCGGACG CCGACACCGG GGAGGTCCTC GCCGCAAAGG ACGCCCACCG CCAGCTCGCC
CCGGCGAGCA CCCTCAAGGT GCTCACCGCG ATCACCCTGA TCCCCCGCCT CGACCCTGCC
GCCGGTGTCG TCGTTCAGCC GGACGCCGTC CGGGTGGACG GCACGAAGGT CGGGGTGGTC
GCCGGGCAGA CCTACAGCGT CCGCGACCTG CTGACGGCGA TGCTGATGAT GTCCGCCAAC
GACGCGGCGG TCGCCCTCGC GGACGCCAAC GGCGGTCTGG AGCAGACCCT CGCCGAGATG
AACGCCGAAG CCGCCTGGCT GAATGCCCGG GACACGGTGG CGAAAACACC CGACGGCTTG
GATGCTCCCA ACCAAGCGTC GTCGGCATAT GACCTCGCGT TGATGTTCCG GGCGGGGTTG
GCGATACCCG CGTTCCGCAC CTACCTGTCG ATCACGCGAA TGCAATTCCC GGCGCCGAAA
GGCGCGTCCT ACCAAATTCA GACGCACGAC CGGCTGCTGC TCACCTATCC CGGAATGATC
GGCGGCAAGA ACGGATACAC GGTGGCGGCG CAGGCGAGCT ACGTCGGTGC GGCCAGGCGG
AACGGTCACA CGATCATCGT CGCGGTGATG CGGGACCAGC CCAATTTCTG GGACGAAGTC
AAGGGACTCT TCGACTGGGG TTTCGCCGTC GACGGCACGG CGACCCCGAT CGGAACCCTC
GTGCCGCCGG GACCCCTGAA ATCGCCGTCG GCGGAGGCGC CCGCACCCTC GCTGCCGGCC
GGCACATCGC ACGTCGCAGC CGCCGCCCGG CCGTCGATGT CTTCCCGCCA CCGGGGAGCA
AGCGACCTCG CAACGGGGTT GGCGGTCGCC GTCGGTGGAT CGATCTTCAT CGGGGCGACG
GCTCGGGCCG CAGCGATCCG GCGGCGGCAG CTGCGTCGTG GGCGCACCAG AACCCGCGGC
CGGGTCGTCA CCGATTCGCG GTACCTCGAA GGACTGTCCC GCCTCGCCCG CGTGGACGAC
ACGTCCGGCC GCCGGTAA
|
|---|
| Protein sequence | MRGRSARWDA RAGCGVGWDA RAHRRFADTC SSPRGGPSCV RYPKPHMPAI PWRRAGGYAV
LVIAVLAQAA LVVGAGTVRR ARADTAGTPL GGPLLGVHGV VTSTGENLPP LPPTTATSFI
VADADTGEVL AAKDAHRQLA PASTLKVLTA ITLIPRLDPA AGVVVQPDAV RVDGTKVGVV
AGQTYSVRDL LTAMLMMSAN DAAVALADAN GGLEQTLAEM NAEAAWLNAR DTVAKTPDGL
DAPNQASSAY DLALMFRAGL AIPAFRTYLS ITRMQFPAPK GASYQIQTHD RLLLTYPGMI
GGKNGYTVAA QASYVGAARR NGHTIIVAVM RDQPNFWDEV KGLFDWGFAV DGTATPIGTL
VPPGPLKSPS AEAPAPSLPA GTSHVAAAAR PSMSSRHRGA SDLATGLAVA VGGSIFIGAT
ARAAAIRRRQ LRRGRTRTRG RVVTDSRYLE GLSRLARVDD TSGRR
|
|---|
| |