Gene Acel_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0390 
Symbol 
ID4486612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp404067 
End bp405089 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID639729157 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_872150 
Protein GI117927599 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CGATGGTGAG CACCGGACGC CGTCCGCGCG TTCTCTCCGG CATTCAACCG 
ACCGCTGATT CCTTCCACCT CGGCAATTAC CTGGGCGCCC TCCGGCACTG GGTGGCGCTG
CAGGACACCC ACGACGCCTT CTACTGCGTC GTCGACTTGC ACGCGCTGAC GCTCGAATGG
GTTCCTGAGC AGCTCCGCGC CCGGACGCGG ATCGCCGCCG CCCAGCTCCT CGCGATCGGC
CTCGACCCGA GCCGGTGCAC CCTGTTCATC CAGAGCCACG TTCCCGAGCA CACCGAACTC
GCGTGGATCT TCGGTTGTCT GACCGGATAC GGCGAGGCAA GCCGGATGAC GCAATTCAAG
GACAAAGCGT CGCGCAGCGA GCACGTCGGC GTCGGGCTCT TCACCTACCC GATTCTGCAG
GCGGCGGACA TCGCGTTGTA TCACGCGGAT CTCGTTCCCG TCGGTGAGGA TCAGCGGCAG
CACCTGGAAC TGACGAGAAA CCTCACGCAG CGGTTCAACG CCCGGTTCGG GCCGACGTTC
ACCGTTCCCG AACCGTATAT CGTAGGCGAA ACCCGAAAAA TAGCGGATCT GCAGCATCCG
ACGGCAAAAA TGAGCAAATC ACTGCCGGAG GCGGGAACGC TGTACCTCCT TGACGAACCG
CGTCGTCTCG CGAAGAAGAT TCGTTCCGCG GTCACCGACA GCGGCACGGA AATCCGCGCG
GACGAAGTGA ACAAGCCCGG TATCACCAAT CTCTTACGGA TATTCTCGGC ATTGACCGGA
CGTGACATTG CGCAGTTGGA AGACGACTAT GCCGGCAAGG GGTACGGTAC ATTCAAGAGC
GACCTTGCCG ATGTCGTCGT CGAATTCGTC GTCCCGATTC AAGAGAGAGT GCGTCGATAC
CTTGACGATC CAGACACGTT GGACGCCGTC CTCACCGAGG GTGCGGATCG GGCTCGGGCC
GTCGCGGCGG AGACGATGGA GACCGTACGG GACCGGGTGG GATTTCTGCC CAGAAAGGCG
TGA
 
Protein sequence
MSDPMVSTGR RPRVLSGIQP TADSFHLGNY LGALRHWVAL QDTHDAFYCV VDLHALTLEW 
VPEQLRARTR IAAAQLLAIG LDPSRCTLFI QSHVPEHTEL AWIFGCLTGY GEASRMTQFK
DKASRSEHVG VGLFTYPILQ AADIALYHAD LVPVGEDQRQ HLELTRNLTQ RFNARFGPTF
TVPEPYIVGE TRKIADLQHP TAKMSKSLPE AGTLYLLDEP RRLAKKIRSA VTDSGTEIRA
DEVNKPGITN LLRIFSALTG RDIAQLEDDY AGKGYGTFKS DLADVVVEFV VPIQERVRRY
LDDPDTLDAV LTEGADRARA VAAETMETVR DRVGFLPRKA