| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0387 |
|---|
| Symbol | |
|---|
| ID | 4486609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | + |
|---|
| Start bp | 400277 |
|---|
| End bp | 401269 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639729154 |
|---|
| Product | malate dehydrogenase (NAD) |
|---|
| Protein accession | YP_872147 |
|---|
| Protein GI | 117927596 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTC CGACAGGGAA TTCTCCAGAA CGACGCGGCA AGGTCGCCGT CATCGGCGCC
GGTTTCTACG GCTCCACCAC GGCGCAACGG CTCGCCGAGT ACGACATCTT TGAGACCGTC
GTGCTCACCG ACATCATCGA AGGCCGTCCC GAAGGCTTGG CCCTGGACAT CAACCAATCC
CGGCCGATCG AGGGTTTCGA AACCAAAGTG ATCGGTAAGA CCACCAGCCC GGACGGCGCA
GGGTACGAGG TCATCGCGGA CGCGTCCATC GTCATCATCA CGGCCGGGGT TCCGCGCAAA
CCCGGTATGA GCCGCATGGA TCTACTGGAG ACGAACGCGC GGATCGTCCG CGGCGTCGCC
GAGAACATTG CGAAGTATGC GCCGTCTGCC GTGGTCATCG TCGTCAGCAA TCCCCTGGAC
GAAATGACAG CGCTGACCCA GTTGGTGACC GGTTTTCCCA AGAATCGGGT GATGGGGCAG
GCCGGGATGC TCGACACCGC GCGTTTCTCG CATTTTGTCG CCGAGGAGCT TGGCGTTCCT
ATCCGCGCGG TGCGCACCCT CACCCTCGGG TCGCACGGCG ACACGATGGT GCCGGTGCCG
TCGCAGTGCT TTGTCACCAT CGACGGCGAG CAGCGTCGTC TGGCCGATCT CGTGCCGCCG
GAGAAAATCC AGGAACTCGT CGAGCGCACC CGCAACGGCG GCGGCGAAAT CGTCGCCTTG
CTCAAGACCG GTTCCGCGTA TTTCGCGCCG TCGGCGGCAG CGGCACGGAT GGCCCGCGCG
GTGGCGGAGG ATTCCGGCCA GGTGCTGCCG GTCTGCGCGT GGGTCGACGG CGAATACGGC
ATTCACGGGG TGTATCTCGG GGTGGAGGCG GAAATCGGCG CCCAGGGCGT ACGACGGGTG
GTCACCACCC CCCTGACCGA ATCCGAACTG GCCGCACTCC ATGAGGCGGC CCGCGCCGTC
GCCGCCAAGC AGGCCGACGT CGCGAATTTG TAA
|
|---|
| Protein sequence | MSAPTGNSPE RRGKVAVIGA GFYGSTTAQR LAEYDIFETV VLTDIIEGRP EGLALDINQS
RPIEGFETKV IGKTTSPDGA GYEVIADASI VIITAGVPRK PGMSRMDLLE TNARIVRGVA
ENIAKYAPSA VVIVVSNPLD EMTALTQLVT GFPKNRVMGQ AGMLDTARFS HFVAEELGVP
IRAVRTLTLG SHGDTMVPVP SQCFVTIDGE QRRLADLVPP EKIQELVERT RNGGGEIVAL
LKTGSAYFAP SAAAARMARA VAEDSGQVLP VCAWVDGEYG IHGVYLGVEA EIGAQGVRRV
VTTPLTESEL AALHEAARAV AAKQADVANL
|
|---|
| |