Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0348 |
Symbol | |
ID | 4486416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 360476 |
End bp | 361120 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639729115 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_872108 |
Protein GI | 117927557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0108508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTCA CGGGCGCGGT CTGTCTTGGC ATTGGCGTTG CGGCGCAGCG TTCTGCGCCG CAACCACCGC CGGCCATTGC CCACGCACCG GTGGTAATCC CTGCGCCGCC CGCATCACCC GGCAACCACG AACCGCCGTC CACGGCGTCG ACGCCGCCGG CCGCGTCCGC ATCCGCCCAG GCGACGAACA CGGCTCCCGC GCCGCCTCCT GTATCCGTTG ACATTCCGGC GATCGGCGTT CACGCCTCGG TCATCCCGCT GGGACTCCAA CCGAACGGCG AAATTCAAGT CCCCGCGGAC GTGCAACACG TCGGGTGGTA CCGCTTGGGA CCGGCTCCCG GTCAGATCGG CCCAGCGGTA TTGCTCGGGC ACGTGGATTC CGCTCATTCC GGCCCAGGCG TCTTCTTTCG ATTGGGCGCG TTGCGCAACG GCGACGTGAT TACCGTGGCC CGCACAGACG GATCCGCCGT GTCGTTCACC GTCTACGCCG TACGCGAATA TCAGAAAGAT TTCTTCCCGA CCGCCTTAGT TTATGGACCG ACGCCGGATC CGGAAATCCG GCTCATCACC TGCGGCGGCG CGTTCGACCG CCACACCGGG CACTATCTTT CGAATATCGT GGTCTTTGCC CGCCTTGCCG GCTAA
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Protein sequence | MFVTGAVCLG IGVAAQRSAP QPPPAIAHAP VVIPAPPASP GNHEPPSTAS TPPAASASAQ ATNTAPAPPP VSVDIPAIGV HASVIPLGLQ PNGEIQVPAD VQHVGWYRLG PAPGQIGPAV LLGHVDSAHS GPGVFFRLGA LRNGDVITVA RTDGSAVSFT VYAVREYQKD FFPTALVYGP TPDPEIRLIT CGGAFDRHTG HYLSNIVVFA RLAG
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