Gene Acel_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0348 
Symbol 
ID4486416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp360476 
End bp361120 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID639729115 
Productpeptidase C60, sortase A and B 
Protein accessionYP_872108 
Protein GI117927557 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0108508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTCA CGGGCGCGGT CTGTCTTGGC ATTGGCGTTG CGGCGCAGCG TTCTGCGCCG 
CAACCACCGC CGGCCATTGC CCACGCACCG GTGGTAATCC CTGCGCCGCC CGCATCACCC
GGCAACCACG AACCGCCGTC CACGGCGTCG ACGCCGCCGG CCGCGTCCGC ATCCGCCCAG
GCGACGAACA CGGCTCCCGC GCCGCCTCCT GTATCCGTTG ACATTCCGGC GATCGGCGTT
CACGCCTCGG TCATCCCGCT GGGACTCCAA CCGAACGGCG AAATTCAAGT CCCCGCGGAC
GTGCAACACG TCGGGTGGTA CCGCTTGGGA CCGGCTCCCG GTCAGATCGG CCCAGCGGTA
TTGCTCGGGC ACGTGGATTC CGCTCATTCC GGCCCAGGCG TCTTCTTTCG ATTGGGCGCG
TTGCGCAACG GCGACGTGAT TACCGTGGCC CGCACAGACG GATCCGCCGT GTCGTTCACC
GTCTACGCCG TACGCGAATA TCAGAAAGAT TTCTTCCCGA CCGCCTTAGT TTATGGACCG
ACGCCGGATC CGGAAATCCG GCTCATCACC TGCGGCGGCG CGTTCGACCG CCACACCGGG
CACTATCTTT CGAATATCGT GGTCTTTGCC CGCCTTGCCG GCTAA
 
Protein sequence
MFVTGAVCLG IGVAAQRSAP QPPPAIAHAP VVIPAPPASP GNHEPPSTAS TPPAASASAQ 
ATNTAPAPPP VSVDIPAIGV HASVIPLGLQ PNGEIQVPAD VQHVGWYRLG PAPGQIGPAV
LLGHVDSAHS GPGVFFRLGA LRNGDVITVA RTDGSAVSFT VYAVREYQKD FFPTALVYGP
TPDPEIRLIT CGGAFDRHTG HYLSNIVVFA RLAG