| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0346 |
|---|
| Symbol | |
|---|
| ID | 4486414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 357532 |
|---|
| End bp | 358047 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639729113 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_872106 |
|---|
| Protein GI | 117927555 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.668512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0212996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGGCA CCAGACAACG GGCGCGCGCC GTTCCCGCCC CGCGGACAAC ACGAGCGCCG
AGCTATCTCA CCGGCGAGTG GAACCTTGGC CGGCTCCTCT CGATGGCTGC CCGAATCGTC
GAGCATGAGT GGAACAGCTG GCTCCAGGAA CTCCAACTCA CTCACGCCGG CCTCCTCGCC
CTGCATGCCC TCCGCGACGG ACCCCTCAGT CAGCGGGAAC TCGCCGCGCG CTGCTCGGTG
GAAGAACAGA CCATGAGCCG GATCGTCGCC AAGCTGGTCC GCGCCGGCTA CGTCACCAAG
GAGCCAGACC CACACGACCG ACGCCGCCGC CGGATCGCAA TGACCGCGCG CGGCAAAGAC
ATCTACCGGG CCGCCAACAG CGGAGATCCG ATCGCCCGAC TGGTCGCCGA CGCCGTCGAC
GACCCCGAGC ATCTCTGGCA CATGCTTCGG TCGATCATCG AGCGGCACCG GCCGGGTGAA
CTCACCATTC CCGGGAATCC GGGCGACCCG GAATAG
|
|---|
| Protein sequence | MRGTRQRARA VPAPRTTRAP SYLTGEWNLG RLLSMAARIV EHEWNSWLQE LQLTHAGLLA
LHALRDGPLS QRELAARCSV EEQTMSRIVA KLVRAGYVTK EPDPHDRRRR RIAMTARGKD
IYRAANSGDP IARLVADAVD DPEHLWHMLR SIIERHRPGE LTIPGNPGDP E
|
|---|
| |