Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0338 |
Symbol | |
ID | 4486406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 348713 |
End bp | 349216 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639729105 |
Product | CopG family transcriptional regulator |
Protein accession | YP_872098 |
Protein GI | 117927547 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.190218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000976234 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGCTGC AACCCATTGT TGATCAAGTG CTGGCTCAGC TCCGCGCCGC CGCGGCCCTC GGCGACGAAC GAACCCGGCA AGTCGCCGAA GCGCTTGCCG CGGCAGCCGA GGCCGCCGTC CGGTTGGCCG TTCTCGACGC CGTCACCCGG GCGGCCGGCG AGATCACCAG CACGCTCTTT GCGGACGGGA TTCCCGGCTC GGTCACCGCG CAGCTGAACG GTGATGACAT CGATGTACAG GTGATCATGC CTCGCGAAGC GCCCGCCGCT GAGCCGTCAC AACCCGCCGA TGGTGAACCG ACGGCGCGGA TCTCGCTCCG GCTCCCCGAA ACCCTCAAGG CCGAGATTGA CCGCGCCGCG GAGCGGGAGG GCGTCTCCGT GAACAGCTGG CTCATCCGCG CCGCCCAACG GGCGCTCAGC CTGCCGCACG GGAATTGGGC GACCGGCTGG CCGTCCGGTT TCGGCTACGG CGCACAGCGG ATCAGCGGCT GGGTGGAGGG GTGA
|
Protein sequence | MQLQPIVDQV LAQLRAAAAL GDERTRQVAE ALAAAAEAAV RLAVLDAVTR AAGEITSTLF ADGIPGSVTA QLNGDDIDVQ VIMPREAPAA EPSQPADGEP TARISLRLPE TLKAEIDRAA EREGVSVNSW LIRAAQRALS LPHGNWATGW PSGFGYGAQR ISGWVEG
|
| |