| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0334 |
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| Symbol | |
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| ID | 4486120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | + |
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| Start bp | 345197 |
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| End bp | 346222 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639729101 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_872094 |
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| Protein GI | 117927543 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0665548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000496522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCTCATCG CACAACGACC AACCATTACC GAAGAACCTG TCCACGACAC GCGGTCACGT
TTCGTGATCG AACCTCTCGA ACCGGGTTTC GGCTACACCC TGGGCAATTC GCTGCGGCGG
ACGCTGCTCT CGTCCATTCC GGGAGCCGCG GTGACGAGCC TGCGCATTGA CGGCGTCCTG
CACGAGTTCT CCACCGTGCC GGGAGCCAAA GAGGACGTCA CCGAGATGAT CCTCAACATC
AAAGAGCTGG TCGTCTCGTC CGAGCACGAC GACCCGCAGG TCATCTACCT CCGCAAGCAA
GGCCCGTGCG AAGTGACGGC GGCGGACATC GTCGCCCCCG CCGGGGTCGA GGTGCACAAT
CCCGACCTGC ACATCGCGAC CCTGAACGAC AAGGGCAAGC TCGAGATCGA GATGGTCGTG
GAGCGGGGTC GTGGTTACGT GCCTGCGGCG CAGAACAAGC TTCCCGGCCA CGAGATCGGC
CGTATTCCCA TTGACTCGAT CTACTCCCCG GTGCTGAAGG TGACGTACAA GGTCGAGGCC
ACCCGTGTCG AGCAGCGCAC CGACTTCGAC CGGTTGATCA TGGACGTCGA GACGAAACCG
TCGATGCGGC CGCGGGACGC CATGGCCAGT GCCGGCAAGA CACTCGTCGA GCTCTTCGGC
CTGGTCCGCG AGCTGAATGT GGACGCTGAA GGCATCGACA TCGGCCCGTC GCCGTCCGAT
GCCGCGCTCG CCGCCGATCT CGCCCTCCCC ATCGAGGATC TCAACCTCAC CGTCCGGTCC
TACAACTGCT TGAAGCGGGA GGGGATCCAC ACGGTCGGCG AGCTCGTCGC GAGGAGCGAG
GCGGATCTCC TGGACATCCG GAATTTCGGC CAGAAGTCGA TCGAAGAGGT GAAGACGAAG
CTGGCGGAGA TGGGTCTGTC GCTCAAGGAC TCTCCGCCGG GATTCGACCC CGGCCGGGTG
GTCTACTCCG CTTCCCGTTC TGACTACGAC GAGGATCAGC GGTATATCGA GACGGAGCAG
CTGTAG
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| Protein sequence | MLIAQRPTIT EEPVHDTRSR FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSLRIDGVL
HEFSTVPGAK EDVTEMILNI KELVVSSEHD DPQVIYLRKQ GPCEVTAADI VAPAGVEVHN
PDLHIATLND KGKLEIEMVV ERGRGYVPAA QNKLPGHEIG RIPIDSIYSP VLKVTYKVEA
TRVEQRTDFD RLIMDVETKP SMRPRDAMAS AGKTLVELFG LVRELNVDAE GIDIGPSPSD
AALAADLALP IEDLNLTVRS YNCLKREGIH TVGELVARSE ADLLDIRNFG QKSIEEVKTK
LAEMGLSLKD SPPGFDPGRV VYSASRSDYD EDQRYIETEQ L
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