Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0330 |
Symbol | rpmJ |
ID | 4486116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 343479 |
End bp | 343592 |
Gene Length | 114 bp |
Protein Length | 37 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639729097 |
Product | 50S ribosomal protein L36 |
Protein accession | YP_872090 |
Protein GI | 117927539 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.121743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000353679 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGGTTA AGCCGAGCGT CAAGAAGATT TGTGACAAGT GCAAGGTGAT CCGGCGACAC GGCCGGGTCA TGGTGATTTG CCAGAATCTG CGGCACAAGC AGCGTCAGGG GTAG
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Protein sequence | MKVKPSVKKI CDKCKVIRRH GRVMVICQNL RHKQRQG
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