Gene Acel_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0321 
Symbol 
ID4486107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp337786 
End bp338325 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID639729088 
Product50S ribosomal protein L6P 
Protein accessionYP_872081 
Protein GI117927530 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00365002 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACGTA TCGGGCGACT TCCCATTCCG GTGCCGGCTG GGGTTGACGT CACGATTGAC 
GGCCGGACGG TCACCGTCAA GGGGCCTCGC GGCACCCTGA CGCACACGAT CGCCGAGCCC
ATCACGGTCG AGAAGGCCGA GGACGGGACC CTGCACGTGC GTCGTCCGGA CGACGAGAAC
CGCACCCGCG GTCTCCACGG GCTGACGCGC ACCCTCATCG CGAACATGAT CACCGGTGTG
ACGCAGGGTT TCGCGAAGAC GCTGGAGATC GTCGGAACCG GTTACCGCGT GCAGGCTCGC
GGCTCCGATC TGGAGTTCGC CCTCGGCTTC AGCCATCCCG TGGTGGTCCG GCCGCCGGAG
GGCATCTCGT TCGAGGTGCA AACGCCCACC CGGTTCGTCG TGCACGGGAT CGACAAGCAG
AAGGTCGGCG AGGTGGCGGC CAACATCCGC AAGCTTCGCA AGCCGGAGCC GTACAAGGGC
AAGGGTGTGC GCTACCAGGG CGAGAACGTG CGCCGCAAGG TCGGAAAGGC TGGAAAGTAA
 
Protein sequence
MSRIGRLPIP VPAGVDVTID GRTVTVKGPR GTLTHTIAEP ITVEKAEDGT LHVRRPDDEN 
RTRGLHGLTR TLIANMITGV TQGFAKTLEI VGTGYRVQAR GSDLEFALGF SHPVVVRPPE
GISFEVQTPT RFVVHGIDKQ KVGEVAANIR KLRKPEPYKG KGVRYQGENV RRKVGKAGK