Gene Acel_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0311 
Symbol 
ID4486465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp332924 
End bp333769 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content74% 
IMG OID639729078 
Product50S ribosomal protein L22P 
Protein accessionYP_872071 
Protein GI117927520 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0022086 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTAGTC CGATGGGATC GACCGCCTCG CTCACCGGCC CGGTCGTCCG GGCGAGGGCA 
CGGCTGCGGT ATTCGACGAT CACTCCGATG AAGGCCCGCC GGGTCGTGGA CCTGGTCCGC
GGTCTGCCGG CCGATGAGGC CCTCACCACC TTGCAGTTCC TGCCGCAGGC CGCCAGCGCG
ACCGTCTACA AGGTGCTCGC CAGCGCCATC GCCAACGCGC AGCAAGAGGC CGCCAAGCAG
GGGGAGCGGC TGGACGCCGA GGATCTCGTC GTCTCGGCCG CGTACGTCGA CGAGGGTCCG
ACGCTCAAAC GGTTCCGGCC GCGGGCCCAG GGTCGGGCGT ACCGGATCCG CAAGCGCACC
AGCCACATCA CCATCCATGT CGAGTCGTGG CCGGCGGAAG CGGAGACCCG CGCGACGAAG
AAGGCCGTGC CGAAGGGGGC CCGCCACCGC CGGCGGCTGA CCGGGGCCGG CAAGCCAGCG
GCGTCCGCGG CGACGGAGAC CCCGGCCGCC CAGCCGGTGG CGGCGACCAC CGAGACCGTG
GAGGTCGAGG CAGCTGCGAC GGCGGGCGCT CCGCCCACGG TTGAGACCCC GGTTGCGGTG
GCGTCCGCGG CGACGGAGAC CCCGGCCGCG ACGGCGGCCG AGACCAAGGC TGGCGGAGCG
GCTGAGGCGG AGGTCGCCAC AACGGACGAG CAGACGACCG AGACCGCTCC GGCAGCGGAG
GCGGAGAAGC CGGCCGTCCG GCGTCCGGCG GCTCGGAAGA GCACGACGTC CGCGCGCCGC
CGCGCAGCGG AGACCGAGGG GCACGATTCG GACGCAGAGT CCACGGATGA AGGAGGGACC
CGCTAG
 
Protein sequence
MASPMGSTAS LTGPVVRARA RLRYSTITPM KARRVVDLVR GLPADEALTT LQFLPQAASA 
TVYKVLASAI ANAQQEAAKQ GERLDAEDLV VSAAYVDEGP TLKRFRPRAQ GRAYRIRKRT
SHITIHVESW PAEAETRATK KAVPKGARHR RRLTGAGKPA ASAATETPAA QPVAATTETV
EVEAAATAGA PPTVETPVAV ASAATETPAA TAAETKAGGA AEAEVATTDE QTTETAPAAE
AEKPAVRRPA ARKSTTSARR RAAETEGHDS DAESTDEGGT R