Gene Acel_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0309 
SymbolrplB 
ID4486463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp331801 
End bp332637 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID639729076 
Product50S ribosomal protein L2 
Protein accessionYP_872069 
Protein GI117927518 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00237082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCATTC GCAAGTACAA GCCGACGACC CCGGGACGGC GGGGCGCGAG CGTCGCCGAC 
TTCGTGGAGA TCACCCGAGA GCACCCGGAG AAGTCGCTGG TCCGGCCGCT GCACTCCAAG
GGCGGCCGGA ACGTCTACGG TCGGATCACC ACGCGGCACC AGGGCGGCGG CCACAAGCGG
GCCTACCGCC TGATCGATTT CAAACGGGCC GACAAGGACG GCGTCCCGGC GAAGGTGGCG
CACATCGAGT ACGACCCCAA CCGCACCGCG CGGATTGCCC TGCTGCACTA CGCGGACGGC
GAGAAGCGCT ACATCTTGGC GCCTGCCCGC CTCGCTCAAG GGGACGTCGT CGAATCGGGT
CCCGGCGCTG ACATCAAGCC CGGGAACAAC CTCCCGCTCC GCAACATCCC GGTGGGAACC
GTGGTGCACG CCATCGAACT TCGTCCAGGC GGTGGCGCGA AGATCGCTCG CTCGGCGGGA
GCGAGCGTGC AGCTCGTCGC CAAGGAAGGG ATGTATGCCC AGCTGCGGAT GCCGTCCGGC
GAGATCCGCA ACGTGGACAT CCGGTGCCGG GCCACGGTCG GCGAGGTCGG CAACGCCGAG
CAGTCCAACA TCAGCTGGGG CAAGGCCGGC CGGATGCGCT GGAAGGGGAA GCGGCCGAGC
GTCCGCGGGG TGGCGATGAA CCCGATCGAC CACCCGCTGG GTGGAGGCGA AGGGAAGTCT
TCGGGCGGCC GCCATCCGGT AAGCCCGTGG GGCAAACCGG AGGGCCGCAC TCGTCGCAAG
CACAAGCCGA GCGACAAGCT GATCGTCCGC CGTCGCAAGT CGAACAAGAA GCGCTAG
 
Protein sequence
MGIRKYKPTT PGRRGASVAD FVEITREHPE KSLVRPLHSK GGRNVYGRIT TRHQGGGHKR 
AYRLIDFKRA DKDGVPAKVA HIEYDPNRTA RIALLHYADG EKRYILAPAR LAQGDVVESG
PGADIKPGNN LPLRNIPVGT VVHAIELRPG GGAKIARSAG ASVQLVAKEG MYAQLRMPSG
EIRNVDIRCR ATVGEVGNAE QSNISWGKAG RMRWKGKRPS VRGVAMNPID HPLGGGEGKS
SGGRHPVSPW GKPEGRTRRK HKPSDKLIVR RRKSNKKR