Gene Acel_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0280 
Symbol 
ID4486543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp299226 
End bp300785 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content67% 
IMG OID639729043 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_872040 
Protein GI117927489 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT ACGCTGCGGC GAATCCGAAC GCCATCCCGG CGCCGCACAT CGAGTACCGG 
GCGTTGCTGC CGATGCTCAT CGTGTTCGGC GTGGCGTGCG CCGGCGTGCT CGTCGAGGCG
TTCGTGCCTC GGGCGCAGCG CGCTCTCACC CAGACGGTGC TTGCCCTCGG TGGGCTCGTG
GCCGCACTGA TTGCAGTGGT GTCGAACACC GGGCTGCCGC GCAAGCTCGT CGCGCAGAGT
GCGATCGCCG CCGATGGTCC GACGCTTTTC ATTCAGGGCA CGATTCTGGC GCTCTCGATC
GGCGCGCTCC TGCTCATCGC CGATCGCAGC ATCGGGGCGG ACAGCGATTT CGTCGCGCAG
GCCGCCGATT TGCCCGGCTC CGAGCAGGAG CGGGCGAGCG TGCAGGCCGG GCTTCGACAG
ACCGAAGTCT TTCCGCTGGC CATGTTCGCG GTCGGCGGGA TGATGCTCTT CCCCGCCGCC
AACGACCTCA TCACCGCATT CGTCGCCCTG GAAGTCCTCT CGCTGCCGCT GTATCTTCTC
GCCGGCATGG CCCGCCGACG CCGCCTGCTC TCGCAGGAAG CGGCGGTCAA ATACTTCCTG
CTGGGCGCGT TCTCCTCCGC GTTCTTCGTA TACGGATTAG CTTTGGTCTA CGGGTACGCG
AAATCCGTTG AATACGGCGA CATCGCCACG GCGCTGACGG CGTCGGACCG CGGCGATTCC
CTCATCATCG TCGGGCTTGC GCTCATCGGC ATTTCGCTGC TCTTCAAGCT TTCCGGGGTT
CCGTTCCATT GGTGGACGCC GGACGTCTAC CAAGGCGCTC CCACACCGAT CACTGCGTTC
ATGGCCGCCG GGACGAAGGT CGCGGCGTTC GGCGCGTTGC TCCGGGTGTT CTTTGTCGCG
TTCGGCGGCC TGGCATGGGA CTGGCGCCCG GTGATCTGGG GCGTGGCGAT CGCGACGATG
GTGGTCGGCG CGATCCTCGG TATCACCCAG ACCGACGTCA AGCGGCTGCT CGCGTACTCC
TCCATCGCGC ACGCGGGATT CGTGCTCACG GCGTTCGCCG CCACGACCCG GGCCAGCGAA
TCGAGCGTCC TCTTCTACCT GGTGGCGTAC GGCTTCATGA CGATCGGCGC CTTTGCCATT
GTGATCTTGG TGCGAGATGG TGATGGTGAG GCGAATCACC TCTCCCGTTG GGTCGGCCTC
GGCCGGCGTT CCCCGCTGGT GGCCGGCATT TTCGCCCTGT TCCTCCTCGC CATGGCCGGG
CTGCCCCCGA CCAGCGGTCT GTGGGCGAAG GTGGCGGTCT TCACGGCTGC CTACCAGGGA
GGCGCCGGAC CGCTGGTGAT CGTTGGTGTG CTCGCCAGCG CCGTCACCGC CTACTACTAC
CTGCGAATCA TCGTCTTGAT GTTCGCGCAG GAGCCTGCGG TCGAGGGGCC GACCGTCGCG
GTGCCCGGCG CGTTGGCCTC GGCGGCGATC GCTCTCGGCG TCATCGTTAC CGTGGTGCTG
GGAATCGTGC CGCAGCCGGT ACTGGATCTC GCGGACAAGG CGGTGCCGTT CCTGCGCTGA
 
Protein sequence
MSFYAAANPN AIPAPHIEYR ALLPMLIVFG VACAGVLVEA FVPRAQRALT QTVLALGGLV 
AALIAVVSNT GLPRKLVAQS AIAADGPTLF IQGTILALSI GALLLIADRS IGADSDFVAQ
AADLPGSEQE RASVQAGLRQ TEVFPLAMFA VGGMMLFPAA NDLITAFVAL EVLSLPLYLL
AGMARRRRLL SQEAAVKYFL LGAFSSAFFV YGLALVYGYA KSVEYGDIAT ALTASDRGDS
LIIVGLALIG ISLLFKLSGV PFHWWTPDVY QGAPTPITAF MAAGTKVAAF GALLRVFFVA
FGGLAWDWRP VIWGVAIATM VVGAILGITQ TDVKRLLAYS SIAHAGFVLT AFAATTRASE
SSVLFYLVAY GFMTIGAFAI VILVRDGDGE ANHLSRWVGL GRRSPLVAGI FALFLLAMAG
LPPTSGLWAK VAVFTAAYQG GAGPLVIVGV LASAVTAYYY LRIIVLMFAQ EPAVEGPTVA
VPGALASAAI ALGVIVTVVL GIVPQPVLDL ADKAVPFLR