Gene Acel_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0278 
Symbol 
ID4485854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp295793 
End bp297697 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content65% 
IMG OID639729041 
ProductNADH dehydrogenase subunit L 
Protein accessionYP_872038 
Protein GI117927487 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACCC CGCATTCGGC GAGCGGCATC TTCAGCCTGA CATGGCTCCT CGTCGCCATT 
CCGCTGGTCA GCGCGGCTGT GCTCATCATC GGCGGACGCC GGACCGACGG TTGGGGGCAT
CTCCTCGGCG TGGCCGCCCC GCTGGCCGCG TTCGTCCTTG GCGTCATTGA GTTTGCGGCA
TTCCTCGGAA AGTCTGCCGC CGAGCGGAGT CTGGACAACC ACGTCTTCGG CTGGACCATC
GTCAACGGGT TCCACGCCGA CATCGGCCTG CAGGTCGATG CGCTCTCCAT CTCCTTCGTT
CTGCTCATCA CCGGCGTCGG GTCACTCATT CACATTTATT CGATCGGATA CATGGCGCAC
GACCCCAAGC GCCGGTTGTT CTTCGGCTAT CTCAATCTTT TCGTCGCCGC CATGCTGCTC
TTGGTCTTGG GCGACAATTA CCTCGCGCTG TACATCGGCT GGGAGGGTGT CGGTCTCGCC
TCCTACCTGC TCATCGGCTT CTGGTCCTAC AAGCCGTCGG CAGCGACCGC GGCGAAGAAG
GCGTTCATCG TCAACCGGGT CGGTGACTTC GGTCTATCCG TCGCCATCAT GCTGATGTTC
GCCACCTTCG GAACGTTCAC CTTCTCCGGG GTCTTTGGCG CGGTGCACGG CGCGGACAGC
GCGACGCTGA ACGCCATTGG ACTCCTCCTC CTGCTGGGTG CGTGCGGAAA ATCCGCGCAG
GTGCCGTTGC AGGCGTGGTT GCTCGACGCG ATGGAGGGCC CGACTCCGGT GTCGGCGCTC
ATCCACGCCG CGACGATGGT CACCGCCGGG GTGTACCTCG TCGCCCGCTC GAATCCGATT
TTCAACGCCG CACCGAGCGC ACAACTCGCC GTCGCCGTTG TCGGTGCCGT CACCCTGCTC
TTCGGCGCCA TCATCGGGTG CGCCAAGGAC GACATCAAGA AGGCGCTGGC GGCCTCCACG
ATGAGTCAGA TCGGGTACAT GACCCTTGCC GTCGGGCTCG GACCGGCCGG ATATGTCTTC
GGCATCGCCC ACCTGTTGAC GCACGGTTTC TTCAAGGCGG GGCTCTTCCT CGGCGCCGGT
TCGGTGATGC ACGCCACCAA CGACGAAGTG GACATGCGCC GGTTCGGCGG GCTGGCCCGG
CCCATGCCGG TGACGTTCGC CACCTTCGGG CTGGCGTATC TGGCCATCAT CGGATTCCCC
GGGTTCTCCG GCTGGTTCAC CAAGGACGCC ATCATTGACG CCGCGTATCA CAAGGGCGGC
ACGTCCGGGT TCCTGCTTGG CAGCGCTGCG CTCGTCGGGG CGGGGATCAC CGCCTTTTAC
ATGAGCCGGG TGGTTTTCAT GACCTTTACC GGGCGTCCCC GGTGGAGCGA CGACGTCCAC
CCGCATGAGG CGCCGAAAGT CATGACCTGG CCGATGATTG TGCTCGCCCT CGGCTCTGTC
GGGGCCGGCT ACGTGCTCAT GCTCGGCAAC CGGTTCGCGG ACTTTCTCGC ACCAGTCGTC
GGCAGGCCCG AGGAATCGTC GGTGAATCCG GGCAGCACGC CGGGGCTGGT GACCCTTGCC
GCGATGGTGG TCGGTGTGGC GATCGCCGCC CTGCTGTACC TGCGCCGGCC GGTGCCGGCG
GTTGCGCCGG CCGGTTCGCC GGTGACGGTC GCCGCCCGCC GCGACCTGTA CGGCGATGCG
TTCAACGAAT CGGTCTTCAT GCGGCCGGGG CAGTACCTGA CGCGGCTGCT CGTCTTCTTC
GACAACAAGG GAATCGACGG TTTCGTCAAC GGACTCGCCG CCTTTCTCGG CGGAACTTCT
GGACGTCTCC GGTACATCCA GACCGGGTTC GTCCGCTCGT ATGCCTTGTC GATGCTGGGC
GGTGCCGCGA TTCTCGTCGC CGCCTTGCTG ATGGTGAGAG GCTGA
 
Protein sequence
MLTPHSASGI FSLTWLLVAI PLVSAAVLII GGRRTDGWGH LLGVAAPLAA FVLGVIEFAA 
FLGKSAAERS LDNHVFGWTI VNGFHADIGL QVDALSISFV LLITGVGSLI HIYSIGYMAH
DPKRRLFFGY LNLFVAAMLL LVLGDNYLAL YIGWEGVGLA SYLLIGFWSY KPSAATAAKK
AFIVNRVGDF GLSVAIMLMF ATFGTFTFSG VFGAVHGADS ATLNAIGLLL LLGACGKSAQ
VPLQAWLLDA MEGPTPVSAL IHAATMVTAG VYLVARSNPI FNAAPSAQLA VAVVGAVTLL
FGAIIGCAKD DIKKALAAST MSQIGYMTLA VGLGPAGYVF GIAHLLTHGF FKAGLFLGAG
SVMHATNDEV DMRRFGGLAR PMPVTFATFG LAYLAIIGFP GFSGWFTKDA IIDAAYHKGG
TSGFLLGSAA LVGAGITAFY MSRVVFMTFT GRPRWSDDVH PHEAPKVMTW PMIVLALGSV
GAGYVLMLGN RFADFLAPVV GRPEESSVNP GSTPGLVTLA AMVVGVAIAA LLYLRRPVPA
VAPAGSPVTV AARRDLYGDA FNESVFMRPG QYLTRLLVFF DNKGIDGFVN GLAAFLGGTS
GRLRYIQTGF VRSYALSMLG GAAILVAALL MVRG