Gene Acel_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0269 
Symbol 
ID4485845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp286149 
End bp286727 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID639729032 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_872029 
Protein GI117927478 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.148576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGTACTGCG CGGTCTGCCC TCGTCGCCCC GCCCCTTCGG CGGCTACTTC 
GACCAGGTGG CGGACACACT GGCCGTCGCC TACCCGCGCC TGCCGGACGC GATCGAACGG
ACAGACGTCG ATCGCGGCGA GCTCACCTTT CACGTGCGCC GGGAATATCT GCGTGAGCTG
GCGCTCGTGC TTCGCGATGA CGAGCGGCTC CGGTTCGAAT TGCTGAATTC GCTCTCCGGG
GTGCACTATC CGACCGACGT CGGCCGCGAA CTGCACGTGG TTTATGAGCT GACGTCGATG
ACGTATCGAC GTCACATCCG GCTGGAAGTC GCCGCCCCCG ACGCCGATCC GCATATTCCG
TCGGTGGTCG ACGTGTGGCC GACGGCCGAT TTCCAGGAGC GGGAGACCTG GGACATGTTC
GGCGTCATCT TTGACGGGCA TCCGGCGCTC ACTCGAATCC TCATGCCGGA TGACTGGCCC
GGGCATCCGC AGCGCAAGGA TTATCCCCTT GGGGGCATTC CCGTGGAGTA CAAGGGAGCC
ACCGTTCCCC CGCCCGATGA GCGCCGCCAG TACGCATGA
 
Protein sequence
MTEPVLRGLP SSPRPFGGYF DQVADTLAVA YPRLPDAIER TDVDRGELTF HVRREYLREL 
ALVLRDDERL RFELLNSLSG VHYPTDVGRE LHVVYELTSM TYRRHIRLEV AAPDADPHIP
SVVDVWPTAD FQERETWDMF GVIFDGHPAL TRILMPDDWP GHPQRKDYPL GGIPVEYKGA
TVPPPDERRQ YA